RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 TNNI3KQ59H18 835 aa29.67■■■□□ 2.34
ERCC2-209ENST00000586856 PRAMEF18Q5VWM3 479 aa29.67■■■□□ 2.34
ERCC2-209ENST00000586856 C2orf69Q8N8R5 385 aa29.67■■■□□ 2.34
ERCC2-209ENST00000586856 GPR108Q9NPR9 543 aa29.67■■■□□ 2.34
ERCC2-209ENST00000586856 FPGT-TNNI3KV9GXZ4 949 aa29.67■■■□□ 2.34
ERCC2-209ENST00000586856 CYP4F22Q6NT55 531 aa29.66■■■□□ 2.34
ERCC2-209ENST00000586856 RPAP2Q8IXW5 612 aaPredicted RBP29.66■■■□□ 2.34
ERCC2-209ENST00000586856 TEKT1Q969V4 418 aa29.66■■■□□ 2.34
ERCC2-209ENST00000586856 CAPNS2Q96L46 248 aa29.66■■■□□ 2.34
ERCC2-209ENST00000586856 VEZTQ9HBM0 779 aa29.66■■■□□ 2.34
ERCC2-209ENST00000586856 PDS5AQ29RF7 1337 aaKnown RBP29.66■■■□□ 2.34
ERCC2-209ENST00000586856 WDR33Q9C0J8 1336 aaKnown RBP29.66■■■□□ 2.34
ERCC2-209ENST00000586856 SALL1Q9NSC2 1324 aa29.66■■■□□ 2.34
ERCC2-209ENST00000586856 HUNKP57058 714 aa29.65■■■□□ 2.34
ERCC2-209ENST00000586856 GORABQ5T7V8 394 aa29.65■■■□□ 2.34
ERCC2-209ENST00000586856 HHIPL1Q96JK4 782 aa29.65■■■□□ 2.34
ERCC2-209ENST00000586856 EXOC6BQ9Y2D4 811 aa29.65■■■□□ 2.34
ERCC2-209ENST00000586856 ECE1P42892 770 aa29.64■■■□□ 2.34
ERCC2-209ENST00000586856 GRM1Q13255 1194 aa29.64■■■□□ 2.34
ERCC2-209ENST00000586856 SPDYE2Q495Y8 402 aa29.64■■■□□ 2.34
ERCC2-209ENST00000586856 PRDX5P30044 214 aa29.63■■■□□ 2.33
ERCC2-209ENST00000586856 RRP1P56182 461 aaKnown RBP29.63■■■□□ 2.33
ERCC2-209ENST00000586856 SIRT2Q8IXJ6 389 aa29.63■■■□□ 2.33
ERCC2-209ENST00000586856 DEFB129Q9H1M3 183 aa29.63■■■□□ 2.33
ERCC2-209ENST00000586856 TDRD3Q9H7E2 651 aaKnown RBP29.63■■■□□ 2.33
ERCC2-209ENST00000586856 ZNF70Q9UC06 446 aaPredicted RBP29.63■■■□□ 2.33
ERCC2-209ENST00000586856 HMMRO75330 724 aa29.62■■■□□ 2.33
ERCC2-209ENST00000586856 PPP2R3BQ9Y5P8 575 aa29.62■■■□□ 2.33
ERCC2-209ENST00000586856 LDHBP07195 334 aaKnown RBP29.61■■■□□ 2.33
ERCC2-209ENST00000586856 ARID4AP29374 1257 aaPredicted RBP29.61■■■□□ 2.33
ERCC2-209ENST00000586856 FKBP1BP68106 108 aa29.61■■■□□ 2.33
ERCC2-209ENST00000586856 ERC1Q8IUD2 1116 aa29.61■■■□□ 2.33
ERCC2-209ENST00000586856 ZDHHC15Q96MV8 337 aa29.61■■■□□ 2.33
ERCC2-209ENST00000586856 DBNDD2Q9BQY9 259 aa29.61■■■□□ 2.33
ERCC2-209ENST00000586856 MRIQ9BWK5 157 aa29.61■■■□□ 2.33
ERCC2-209ENST00000586856 NF2P35240 595 aa29.6■■■□□ 2.33
ERCC2-209ENST00000586856 HHIPL2Q6UWX4 724 aa29.6■■■□□ 2.33
ERCC2-209ENST00000586856 ZGPATQ8N5A5 531 aaKnown RBP29.6■■■□□ 2.33
ERCC2-209ENST00000586856 SSC5DA1L4H1 1573 aa29.6■■■□□ 2.33
ERCC2-209ENST00000586856 DIXDC1Q155Q3 683 aa29.59■■■□□ 2.33
ERCC2-209ENST00000586856 HSP90AB4PQ58FF6 505 aa29.59■■■□□ 2.33
ERCC2-209ENST00000586856 HMG20BQ9P0W2 317 aa29.59■■■□□ 2.33
ERCC2-209ENST00000586856 MYH2Q9UKX2 1941 aa29.59■■■□□ 2.33
ERCC2-209ENST00000586856 UQCRFS1P1P0C7P4 283 aa29.58■■■□□ 2.33
ERCC2-209ENST00000586856 HSPA1AP0DMV8 641 aaKnown RBP29.58■■■□□ 2.33
ERCC2-209ENST00000586856 HSPA1BP0DMV9 641 aaKnown RBP29.58■■■□□ 2.33
ERCC2-209ENST00000586856 TNFAIP1Q13829 316 aa29.58■■■□□ 2.33
ERCC2-209ENST00000586856 PI16Q6UXB8 463 aa29.58■■■□□ 2.33
ERCC2-209ENST00000586856 DBNLQ9UJU6 430 aaKnown RBP29.58■■■□□ 2.33
ERCC2-209ENST00000586856 AKAP11Q9UKA4 1901 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 APOBEC3HQ6NTF7 200 aaKnown RBP29.57■■■□□ 2.32
ERCC2-209ENST00000586856 RGMBQ6NW40 437 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 MOB2Q70IA6 237 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 SPATA5Q8NB90 893 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 EAF2Q96CJ1 260 aaPredicted RBP29.57■■■□□ 2.32
ERCC2-209ENST00000586856 TLR7Q9NYK1 1049 aaKnown RBP29.57■■■□□ 2.32
ERCC2-209ENST00000586856 ABCF2Q9UG63 623 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 DAGLAQ9Y4D2 1042 aa29.57■■■□□ 2.32
ERCC2-209ENST00000586856 MCAMP43121 646 aa29.56■■■□□ 2.32
ERCC2-209ENST00000586856 TTLL12Q14166 644 aaPredicted RBP29.56■■■□□ 2.32
ERCC2-209ENST00000586856 RASA3Q14644 834 aa29.56■■■□□ 2.32
ERCC2-209ENST00000586856 TTC39AQ5SRH9 613 aa29.56■■■□□ 2.32
ERCC2-209ENST00000586856 AOC2O75106 756 aa29.55■■■□□ 2.32
ERCC2-209ENST00000586856 CCDC158Q5M9N0 1113 aa29.55■■■□□ 2.32
ERCC2-209ENST00000586856 MAST2Q6P0Q8 1798 aa29.54■■■□□ 2.32
ERCC2-209ENST00000586856 TCP10L2B9ZVM9 353 aa29.54■■■□□ 2.32
ERCC2-209ENST00000586856 CACNB3P54284 484 aa29.54■■■□□ 2.32
ERCC2-209ENST00000586856 DZIP1Q86YF9 867 aaKnown RBP29.54■■■□□ 2.32
ERCC2-209ENST00000586856 RHPN1Q8TCX5 695 aa29.54■■■□□ 2.32
ERCC2-209ENST00000586856 CCDC8Q9H0W5 538 aaPredicted RBP29.54■■■□□ 2.32
ERCC2-209ENST00000586856 TMOD2Q9NZR1 351 aa29.54■■■□□ 2.32
ERCC2-209ENST00000586856 APBB1O00213 710 aa29.53■■■□□ 2.32
ERCC2-209ENST00000586856 SPTY2D1Q68D10 685 aaPredicted RBP29.53■■■□□ 2.32
ERCC2-209ENST00000586856 AACSQ86V21 672 aa29.53■■■□□ 2.32
ERCC2-209ENST00000586856 IL1RAPL2Q9NP60 686 aa29.53■■■□□ 2.32
ERCC2-209ENST00000586856 UBE2Q2LH0YL09 131 aa29.52■■■□□ 2.32
ERCC2-209ENST00000586856 TNNI2P48788 182 aa29.52■■■□□ 2.32
ERCC2-209ENST00000586856 ZNF157P51786 506 aaPredicted RBP29.52■■■□□ 2.32
ERCC2-209ENST00000586856 PRKG1Q13976 671 aa29.52■■■□□ 2.32
ERCC2-209ENST00000586856 FAM155AB1AL88 458 aaPredicted RBP29.51■■■□□ 2.31
ERCC2-209ENST00000586856 MAP2K2P36507 400 aa29.51■■■□□ 2.31
ERCC2-209ENST00000586856 NBPF12Q5TAG4 269 aaPredicted RBP29.51■■■□□ 2.31
ERCC2-209ENST00000586856 TBC1D9Q6ZT07 1266 aa29.51■■■□□ 2.31
ERCC2-209ENST00000586856 ERICH6Q7L0X2 663 aa29.51■■■□□ 2.31
ERCC2-209ENST00000586856 KIF1BPQ96EK5 621 aa29.51■■■□□ 2.31
ERCC2-209ENST00000586856 GAKO14976 1311 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 NOGQ13253 232 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 SUPT20HL1Q3ZLR7 823 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 ARMC9Q7Z3E5 817 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 CCDC102AQ96A19 550 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 ZNF512BQ96KM6 892 aaPredicted RBP29.5■■■□□ 2.31
ERCC2-209ENST00000586856 TMEM39BQ9GZU3 492 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 SNRKQ9NRH2 765 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 WBP1LQ9NX94 342 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 FZD1Q9UP38 647 aa29.5■■■□□ 2.31
ERCC2-209ENST00000586856 RAB11FIP3O75154 756 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 SLC10A3P09131 477 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 MAP2K1Q02750 393 aaPredicted RBP29.49■■■□□ 2.31
ERCC2-209ENST00000586856 FKBP1CQ5VVH2 108 aa29.49■■■□□ 2.31
ERCC2-209ENST00000586856 RASAL3Q86YV0 1011 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms