RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 AKAP11Q9UKA4 1901 aa23.34■■□□□ 1.33
DDX39A-204ENST00000586558 TTF1Q15361 905 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-204ENST00000586558 EAPPQ56P03 285 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-204ENST00000586558 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
DDX39A-204ENST00000586558 LDHDQ86WU2 507 aa23.34■■□□□ 1.33
DDX39A-204ENST00000586558 OTUD7AQ8TE49 926 aaPredicted RBP23.34■■□□□ 1.33
DDX39A-204ENST00000586558 ZC3H15Q8WU90 426 aaKnown RBP23.34■■□□□ 1.33
DDX39A-204ENST00000586558 HAUS7Q99871 368 aa23.34■■□□□ 1.33
DDX39A-204ENST00000586558 STAP2Q9UGK3 403 aa23.34■■□□□ 1.33
DDX39A-204ENST00000586558 DLGAP5Q15398 846 aa23.33■■□□□ 1.33
DDX39A-204ENST00000586558 DZIP1Q86YF9 867 aaKnown RBP23.33■■□□□ 1.33
DDX39A-204ENST00000586558 SLF2Q8IX21 1173 aa23.33■■□□□ 1.33
DDX39A-204ENST00000586558 TEKT1Q969V4 418 aa23.33■■□□□ 1.33
DDX39A-204ENST00000586558 PPP4R2Q9NY27 417 aa23.33■■□□□ 1.33
DDX39A-204ENST00000586558 LRP2BPQ9P2M1 347 aa23.33■■□□□ 1.33
DDX39A-204ENST00000586558 GLRX3O76003 335 aaKnown RBP23.32■■□□□ 1.32
DDX39A-204ENST00000586558 EGFRP00533 1210 aa23.32■■□□□ 1.32
DDX39A-204ENST00000586558 RBM26Q5T8P6 1007 aaKnown RBP23.32■■□□□ 1.32
DDX39A-204ENST00000586558 TMED8Q6PL24 325 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-204ENST00000586558 HHIPL2Q6UWX4 724 aa23.32■■□□□ 1.32
DDX39A-204ENST00000586558 TBC1D9Q6ZT07 1266 aa23.32■■□□□ 1.32
DDX39A-204ENST00000586558 ZBED3Q96IU2 234 aaPredicted RBP23.32■■□□□ 1.32
DDX39A-204ENST00000586558 BOLA2Q9H3K6 86 aa23.32■■□□□ 1.32
DDX39A-204ENST00000586558 AOX1Q06278 1338 aa23.32■■□□□ 1.32
DDX39A-204ENST00000586558 TOMM70O94826 608 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 CRKP46108 304 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 HIRAP54198 1017 aaPredicted RBP23.31■■□□□ 1.32
DDX39A-204ENST00000586558 PDE1AP54750 535 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 GSTO1P78417 241 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 CFAP100Q494V2 611 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 RBM46Q8TBY0 533 aaKnown RBP23.31■■□□□ 1.32
DDX39A-204ENST00000586558 DNAJC2Q99543 621 aaKnown RBP23.31■■□□□ 1.32
DDX39A-204ENST00000586558 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 RAI14Q9P0K7 980 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 ADAMTSL1Q8N6G6 1762 aa23.31■■□□□ 1.32
DDX39A-204ENST00000586558 SPDYE2BA6NHP3 402 aa23.3■■□□□ 1.32
DDX39A-204ENST00000586558 SPDYE6P0CI01 402 aa23.3■■□□□ 1.32
DDX39A-204ENST00000586558 RBM5P52756 815 aaKnown RBP eCLIP23.3■■□□□ 1.324e-7■□□□□ 8.1
DDX39A-204ENST00000586558 PI4K2BQ8TCG2 481 aa23.3■■□□□ 1.32
DDX39A-204ENST00000586558 ZDHHC15Q96MV8 337 aa23.3■■□□□ 1.32
DDX39A-204ENST00000586558 PIH1D3Q9NQM4 214 aaKnown RBP23.3■■□□□ 1.32
DDX39A-204ENST00000586558 PGAP2Q9UHJ9 254 aa23.3■■□□□ 1.32
DDX39A-204ENST00000586558 GOLIM4O00461 696 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 WNT10BO00744 389 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 MECOMQ03112 1051 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 TSHZ3Q63HK5 1081 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 CLEC11AQ9Y240 323 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 NDUFB9Q9Y6M9 179 aa23.29■■□□□ 1.32
DDX39A-204ENST00000586558 MYO1BO43795 1136 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 LDHCP07864 332 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 POTEIP0CG38 1075 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 POTEJP0CG39 1038 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 MAP3K12Q12852 859 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 CHADLQ6NUI6 762 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 SMC1BQ8NDV3 1235 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 NSUN4Q96CB9 384 aaKnown RBP23.28■■□□□ 1.32
DDX39A-204ENST00000586558 FAM163AQ96GL9 167 aaPredicted RBP23.28■■□□□ 1.32
DDX39A-204ENST00000586558 OSBPL3Q9H4L5 887 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 ANTXR1Q9H6X2 564 aa23.28■■□□□ 1.32
DDX39A-204ENST00000586558 IDH1O75874 414 aaKnown RBP23.27■■□□□ 1.32
DDX39A-204ENST00000586558 DIXDC1Q155Q3 683 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 NBPF9Q3BBW0 867 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 PLEKHM2Q8IWE5 1019 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 DAGLAQ9Y4D2 1042 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 GAKO14976 1311 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 PITPNM2Q9BZ72 1349 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 MAST2Q6P0Q8 1798 aa23.27■■□□□ 1.32
DDX39A-204ENST00000586558 PRMT6Q96LA8 375 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-204ENST00000586558 GGA3Q9NZ52 723 aa23.26■■□□□ 1.31
DDX39A-204ENST00000586558 MROH7-TTC4A0A0A0MT08 1334 aa23.26■■□□□ 1.31
DDX39A-204ENST00000586558 FSTL1Q12841 308 aa23.25■■□□□ 1.31
DDX39A-204ENST00000586558 NAA16Q6N069 864 aaPredicted RBP23.25■■□□□ 1.31
DDX39A-204ENST00000586558 ZNF384Q8TF68 577 aa23.25■■□□□ 1.31
DDX39A-204ENST00000586558 DCPSQ96C86 337 aaKnown RBP23.25■■□□□ 1.31
DDX39A-204ENST00000586558 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.25■■□□□ 1.314e-20■□□□□ 10.4
DDX39A-204ENST00000586558 DOCK2Q92608 1830 aa23.24■■□□□ 1.31
DDX39A-204ENST00000586558 APOBEC3HQ6NTF7 200 aaKnown RBP23.24■■□□□ 1.31
DDX39A-204ENST00000586558 EDC3Q96F86 508 aaKnown RBP23.24■■□□□ 1.31
DDX39A-204ENST00000586558 PDE4AP27815 886 aa23.23■■□□□ 1.31
DDX39A-204ENST00000586558 SPDYE2Q495Y8 402 aa23.23■■□□□ 1.31
DDX39A-204ENST00000586558 ANGEL2Q5VTE6 544 aaKnown RBP23.23■■□□□ 1.31
DDX39A-204ENST00000586558 APOBEC3FQ8IUX4 373 aaKnown RBP23.23■■□□□ 1.31
DDX39A-204ENST00000586558 KBTBD3Q8NAB2 608 aa23.23■■□□□ 1.31
DDX39A-204ENST00000586558 PCDHAC2Q9Y5I4 1007 aa23.23■■□□□ 1.31
DDX39A-204ENST00000586558 MAP1SQ66K74 1059 aaPredicted RBP23.22■■□□□ 1.31
DDX39A-204ENST00000586558 ZSCAN25Q6NSZ9 544 aa23.22■■□□□ 1.31
DDX39A-204ENST00000586558 SULF1Q8IWU6 871 aa23.22■■□□□ 1.31
DDX39A-204ENST00000586558 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
DDX39A-204ENST00000586558 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 MAP4K4O95819 1239 aaPredicted RBP23.21■■□□□ 1.31
DDX39A-204ENST00000586558 LRRFIP1Q32MZ4 808 aaKnown RBP23.21■■□□□ 1.31
DDX39A-204ENST00000586558 SLC9C2Q5TAH2 1124 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 CDC37L1Q7L3B6 337 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 KRT26Q7Z3Y9 468 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 CERS3Q8IU89 383 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 CNTROBQ8N137 903 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
DDX39A-204ENST00000586558 NOL10Q9BSC4 688 aaKnown RBP23.21■■□□□ 1.31
DDX39A-204ENST00000586558 TDRD3Q9H7E2 651 aaKnown RBP23.21■■□□□ 1.31
DDX39A-204ENST00000586558 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms