RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DGKZQ13574 1117 aa13.99□□□□□ -0.17
ACTN4-209ENST00000586538 LDLRAD1Q5T700 205 aa13.99□□□□□ -0.17
ACTN4-209ENST00000586538 INTS3Q68E01 1043 aaKnown RBP13.99□□□□□ -0.17
ACTN4-209ENST00000586538 DZIP1LQ8IYY4 767 aaKnown RBP13.99□□□□□ -0.17
ACTN4-209ENST00000586538 ANKRD13AQ8IZ07 590 aa13.99□□□□□ -0.17
ACTN4-209ENST00000586538 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
ACTN4-209ENST00000586538 SLC10A4Q96EP9 437 aa13.99□□□□□ -0.17
ACTN4-209ENST00000586538 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
ACTN4-209ENST00000586538 SEMA3EO15041 775 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 RFX5P48382 616 aaPredicted RBP13.98□□□□□ -0.17
ACTN4-209ENST00000586538 PRKG1Q13976 671 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 RASA3Q14644 834 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 NOM1Q5C9Z4 860 aaKnown RBP13.98□□□□□ -0.17
ACTN4-209ENST00000586538 OTUD7BQ6GQQ9 843 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 MOB2Q70IA6 237 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 KLHDC4Q8TBB5 520 aa13.98□□□□□ -0.17
ACTN4-209ENST00000586538 ZNF70Q9UC06 446 aaPredicted RBP13.98□□□□□ -0.17
ACTN4-209ENST00000586538 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
ACTN4-209ENST00000586538 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 BCAMP50895 628 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 PKN2Q16513 984 aaKnown RBP13.97□□□□□ -0.17
ACTN4-209ENST00000586538 ATP2B3Q16720 1220 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 SPRYD7Q5W111 196 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 HHIPL2Q6UWX4 724 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 ATF7IPQ6VMQ6 1270 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 MCOLN1Q9GZU1 580 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 SIL1Q9H173 461 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 COPRSQ9NQ92 184 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 DENND2AQ9ULE3 1009 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 IQSEC3Q9UPP2 1182 aaPredicted RBP13.97□□□□□ -0.17
ACTN4-209ENST00000586538 AKAP2Q9Y2D5 859 aa13.97□□□□□ -0.17
ACTN4-209ENST00000586538 CCDC85CA6NKD9 419 aa13.96□□□□□ -0.17
ACTN4-209ENST00000586538 ZBTB22O15209 634 aa13.96□□□□□ -0.17
ACTN4-209ENST00000586538 FKBP1CQ5VVH2 108 aa13.96□□□□□ -0.17
ACTN4-209ENST00000586538 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
ACTN4-209ENST00000586538 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.17
ACTN4-209ENST00000586538 ZDHHC15Q96MV8 337 aa13.96□□□□□ -0.17
ACTN4-209ENST00000586538 CFHR5Q9BXR6 569 aa13.96□□□□□ -0.17
ACTN4-209ENST00000586538 TDRD3Q9H7E2 651 aaKnown RBP13.96□□□□□ -0.17
ACTN4-209ENST00000586538 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
ACTN4-209ENST00000586538 MTX1Q13505 466 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 NBPF12Q5TAG4 269 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-209ENST00000586538 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 SLF2Q8IX21 1173 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-209ENST00000586538 MEIS3Q99687 375 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 CSADQ9Y600 493 aa13.95□□□□□ -0.18
ACTN4-209ENST00000586538 RPAP1Q9BWH6 1393 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-209ENST00000586538 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 LAMB1P07942 1786 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 SSC5DA1L4H1 1573 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 TCP10L2B9ZVM9 353 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 SRGAP3O43295 1099 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 WDHD1O75717 1129 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-209ENST00000586538 GNAI2P04899 355 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 TRIM27P14373 513 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 MKRN3Q13064 507 aaKnown RBP13.94□□□□□ -0.18
ACTN4-209ENST00000586538 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 DCAF15Q66K64 600 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 WNK4Q96J92 1243 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
ACTN4-209ENST00000586538 PDS5AQ29RF7 1337 aaKnown RBP13.93□□□□□ -0.18
ACTN4-209ENST00000586538 LDHBP07195 334 aaKnown RBP13.93□□□□□ -0.18
ACTN4-209ENST00000586538 MVPQ14764 893 aaKnown RBP13.93□□□□□ -0.18
ACTN4-209ENST00000586538 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
ACTN4-209ENST00000586538 USP2O75604 605 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-209ENST00000586538 SPTY2D1Q68D10 685 aaPredicted RBP13.92□□□□□ -0.18
ACTN4-209ENST00000586538 GPR25O00155 361 aa13.91□□□□□ -0.18
ACTN4-209ENST00000586538 FKTNO75072 461 aa13.91□□□□□ -0.18
ACTN4-209ENST00000586538 GTF2A2P52657 109 aa13.91□□□□□ -0.18
ACTN4-209ENST00000586538 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
ACTN4-209ENST00000586538 ZNF296Q8WUU4 475 aaPredicted RBP13.91□□□□□ -0.18
ACTN4-209ENST00000586538 TMEM39BQ9GZU3 492 aa13.91□□□□□ -0.18
ACTN4-209ENST00000586538 TBC1D8O95759 1140 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 MAP3K9P80192 1104 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 G3BP1Q13283 466 aaKnown RBP eCLIP13.9□□□□□ -0.184e-10■■□□□ 14.3
ACTN4-209ENST00000586538 ARHGEF6Q15052 776 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 GORABQ5T7V8 394 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 CCDC102BQ68D86 513 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 APOBEC3HQ6NTF7 200 aaKnown RBP13.9□□□□□ -0.18
ACTN4-209ENST00000586538 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
ACTN4-209ENST00000586538 CLMNQ96JQ2 1002 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 TEPSINQ96N21 525 aa13.9□□□□□ -0.18
ACTN4-209ENST00000586538 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
ACTN4-209ENST00000586538 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.19
ACTN4-209ENST00000586538 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 A0A1B0GUL7 405 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 BCAR3O75815 825 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 MLLT1Q03111 559 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-209ENST00000586538 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.89□□□□□ -0.19
ACTN4-209ENST00000586538 FAM151AQ8WW52 585 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 OPTNQ96CV9 577 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 ELP3Q9H9T3 547 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
ACTN4-209ENST00000586538 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 AOX1Q06278 1338 aa13.89□□□□□ -0.19
ACTN4-209ENST00000586538 TESPA1A2RU30 521 aaPredicted RBP13.88□□□□□ -0.19
ACTN4-209ENST00000586538 MS4A1P11836 297 aa13.88□□□□□ -0.19
ACTN4-209ENST00000586538 PRDX5P30044 214 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms