RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 GBA2Q9HCG7 927 aaPredicted RBP10.68□□□□□ -0.7
ATG4D-202ENST00000585437 GPR108Q9NPR9 543 aa10.68□□□□□ -0.7
ATG4D-202ENST00000585437 AKAP2Q9Y2D5 859 aa10.68□□□□□ -0.7
ATG4D-202ENST00000585437 ECE1P42892 770 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 CRKP46108 304 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 TIMM10P62072 90 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 FKBP1BP68106 108 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 RASGRF1Q13972 1273 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 C20orf194Q5TEA3 1177 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 MRIQ9BWK5 157 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 SCAF8Q9UPN6 1271 aaKnown RBP10.67□□□□□ -0.7
ATG4D-202ENST00000585437 COG6Q9Y2V7 657 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 PPP2R3BQ9Y5P8 575 aa10.67□□□□□ -0.7
ATG4D-202ENST00000585437 RFX7Q2KHR2 1363 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 RPAP1Q9BWH6 1393 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 SIPA1L1O43166 1804 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 FAM155AB1AL88 458 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 FRAT2O75474 233 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 ARID4AP29374 1257 aaPredicted RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 HUNKP57058 714 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 G3BP1Q13283 466 aaKnown RBP eCLIP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 CYP4F22Q6NT55 531 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 HHIPL2Q6UWX4 724 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 TEKT1Q969V4 418 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 ZDHHC15Q96MV8 337 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 GNL3LQ9NVN8 582 aaKnown RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 PPP4R2Q9NY27 417 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 DENND2AQ9ULE3 1009 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 DDX60LQ5H9U9 1706 aaKnown RBP10.66□□□□□ -0.7
ATG4D-202ENST00000585437 AK9Q5TCS8 1911 aa10.66□□□□□ -0.7
ATG4D-202ENST00000585437 ATAD5Q96QE3 1844 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 CLRN2A0PK11 232 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 MYO1BO43795 1136 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 SURF6O75683 361 aaKnown RBP10.65□□□□□ -0.7
ATG4D-202ENST00000585437 HSPA1AP0DMV8 641 aaKnown RBP10.65□□□□□ -0.7
ATG4D-202ENST00000585437 HSPA1BP0DMV9 641 aaKnown RBP10.65□□□□□ -0.7
ATG4D-202ENST00000585437 PRDX5P30044 214 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 TNNI3KQ59H18 835 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 SIRT2Q8IXJ6 389 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 RPAP2Q8IXW5 612 aaPredicted RBP10.65□□□□□ -0.7
ATG4D-202ENST00000585437 C2orf69Q8N8R5 385 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.65□□□□□ -0.7
ATG4D-202ENST00000585437 DEFB129Q9H1M3 183 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 WBP1LQ9NX94 342 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 FPGT-TNNI3KV9GXZ4 949 aa10.65□□□□□ -0.7
ATG4D-202ENST00000585437 DOCK1Q14185 1865 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 PHIPQ8WWQ0 1821 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 SLC10A3P09131 477 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 MAP2K2P36507 400 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 RBM5P52756 815 aaKnown RBP eCLIP10.64□□□□□ -0.71
ATG4D-202ENST00000585437 MAP3K11Q16584 847 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 FKBP1CQ5VVH2 108 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 APOBEC3HQ6NTF7 200 aaKnown RBP10.64□□□□□ -0.71
ATG4D-202ENST00000585437 RGMBQ6NW40 437 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 TEPSINQ96N21 525 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 CHMP4BQ9H444 224 aaKnown RBP10.64□□□□□ -0.71
ATG4D-202ENST00000585437 TDRD3Q9H7E2 651 aaKnown RBP10.64□□□□□ -0.71
ATG4D-202ENST00000585437 ZNF70Q9UC06 446 aaPredicted RBP10.64□□□□□ -0.71
ATG4D-202ENST00000585437 PTPRFP10586 1907 aa10.64□□□□□ -0.71
ATG4D-202ENST00000585437 GAKO14976 1311 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 LDHBP07195 334 aaKnown RBP10.63□□□□□ -0.71
ATG4D-202ENST00000585437 MCAMP43121 646 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 NOGQ13253 232 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 TNFAIP1Q13829 316 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 DIXDC1Q155Q3 683 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 RASAL3Q86YV0 1011 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 ZGPATQ8N5A5 531 aaKnown RBP10.63□□□□□ -0.71
ATG4D-202ENST00000585437 ZNF512BQ96KM6 892 aaPredicted RBP10.63□□□□□ -0.71
ATG4D-202ENST00000585437 NEUROD6Q96NK8 337 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 HMG20BQ9P0W2 317 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 DBNLQ9UJU6 430 aaKnown RBP10.63□□□□□ -0.71
ATG4D-202ENST00000585437 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
ATG4D-202ENST00000585437 NAV1Q8NEY1 1877 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 AOC2O75106 756 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 NF2P35240 595 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
ATG4D-202ENST00000585437 MAP2K1Q02750 393 aaPredicted RBP10.62□□□□□ -0.71
ATG4D-202ENST00000585437 RASA3Q14644 834 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 LDLRAD1Q5T700 205 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 PI16Q6UXB8 463 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 PAXIP1Q6ZW49 1069 aaPredicted RBP10.62□□□□□ -0.71
ATG4D-202ENST00000585437 MOB2Q70IA6 237 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 ERC1Q8IUD2 1116 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 ZNF384Q8TF68 577 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
ATG4D-202ENST00000585437 DBNDD2Q9BQY9 259 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 VEZTQ9HBM0 779 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 EXOC6BQ9Y2D4 811 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 MYH1P12882 1939 aa10.62□□□□□ -0.71
ATG4D-202ENST00000585437 COL2A1P02458 1487 aaPredicted RBP10.61□□□□□ -0.71
ATG4D-202ENST00000585437 UNCXA6NJT0 531 aa10.61□□□□□ -0.71
ATG4D-202ENST00000585437 FOXN1O15353 648 aa10.61□□□□□ -0.71
ATG4D-202ENST00000585437 HMMRO75330 724 aa10.61□□□□□ -0.71
ATG4D-202ENST00000585437 UQCRFS1P1P0C7P4 283 aa10.61□□□□□ -0.71
ATG4D-202ENST00000585437 OS9Q13438 667 aaPredicted RBP10.61□□□□□ -0.71
ATG4D-202ENST00000585437 HSP90AB4PQ58FF6 505 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms