RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
CASC3-210ENST00000584997 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
CASC3-210ENST00000584997 MRS2Q9HD23 443 aa13.15□□□□□ -0.3
CASC3-210ENST00000584997 CSADQ9Y600 493 aa13.15□□□□□ -0.3
CASC3-210ENST00000584997 CRKP46108 304 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 ARHGEF6Q15052 776 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 TAF1CQ15572 869 aaPredicted RBP13.14□□□□□ -0.31
CASC3-210ENST00000584997 VPS37DQ86XT2 251 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 ARMC5Q96C12 935 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 TMEM106CQ9BVX2 250 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 SRCIN1Q9C0H9 1055 aa13.14□□□□□ -0.31
CASC3-210ENST00000584997 CCL15-CCL14A0A0B4J2E2 113 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
CASC3-210ENST00000584997 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 GTF2A2P52657 109 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 VGLL4Q14135 290 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 CCL15Q16663 113 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 CDAN1Q8IWY9 1227 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 FAM84BQ96KN1 310 aaPredicted RBP13.13□□□□□ -0.31
CASC3-210ENST00000584997 TEPSINQ96N21 525 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 TMEM39BQ9GZU3 492 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 ZFYVE28Q9HCC9 887 aa13.13□□□□□ -0.31
CASC3-210ENST00000584997 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 EN2P19622 333 aaPredicted RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 CHAF1AQ13111 956 aaPredicted RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 HABP4Q5JVS0 413 aaKnown RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.12□□□□□ -0.31
CASC3-210ENST00000584997 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 BRI3BPQ8WY22 251 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 OTUD5Q96G74 571 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 PUS3Q9BZE2 481 aaKnown RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
CASC3-210ENST00000584997 CEP290O15078 2479 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 MROH5Q6ZUA9 1318 aa13.12□□□□□ -0.31
CASC3-210ENST00000584997 CAP1Q01518 475 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 CAVIN4Q5BKX8 364 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 NBPF11Q86T75 865 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 TBC1D22AQ8WUA7 517 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 TEKT1Q969V4 418 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 TMOD2Q9NZR1 351 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 PTCH2Q9Y6C5 1203 aa13.11□□□□□ -0.31
CASC3-210ENST00000584997 CACNB3P54284 484 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 METTL24Q5JXM2 366 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 RIPOR2Q9Y4F9 1068 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 BRCA2P51587 3418 aa13.1□□□□□ -0.31
CASC3-210ENST00000584997 MYH13Q9UKX3 1938 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 SPDYE5A6NIY4 337 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 KCNA4P22459 653 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
CASC3-210ENST00000584997 KIF22Q14807 665 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 GRIK5Q16478 980 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 SLC4A8Q2Y0W8 1093 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
CASC3-210ENST00000584997 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
CASC3-210ENST00000584997 MAST3O60307 1309 aa13.09□□□□□ -0.31
CASC3-210ENST00000584997 AK9Q5TCS8 1911 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 MYCP01106 439 aaPredicted RBP13.08□□□□□ -0.32
CASC3-210ENST00000584997 NBPF7P0C2Y1 421 aaPredicted RBP13.08□□□□□ -0.32
CASC3-210ENST00000584997 CETPP11597 493 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 FBXO33Q7Z6M2 555 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
CASC3-210ENST00000584997 ZSWIM8A7E2V4 1837 aa13.08□□□□□ -0.32
CASC3-210ENST00000584997 ANP32CO43423 234 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 TLR2O60603 784 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 SNAPC2Q13487 334 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 LRRC24Q50LG9 513 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 DCAF15Q66K64 600 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 FAM83AQ86UY5 434 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 ZKSCAN4Q969J2 545 aaPredicted RBP13.07□□□□□ -0.32
CASC3-210ENST00000584997 ZDHHC15Q96MV8 337 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
CASC3-210ENST00000584997 SNCAIPQ9Y6H5 919 aa13.07□□□□□ -0.32
CASC3-210ENST00000584997 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 IRF6O14896 467 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 PDE8BO95263 885 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 BCAMP50895 628 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 LACTBP83111 547 aaPredicted RBP13.06□□□□□ -0.32
CASC3-210ENST00000584997 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
CASC3-210ENST00000584997 MIER1Q8N108 512 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 ARHGAP39Q9C0H5 1083 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 UTYO14607 1347 aa13.06□□□□□ -0.32
CASC3-210ENST00000584997 RPAP1Q9BWH6 1393 aaPredicted RBP13.06□□□□□ -0.32
CASC3-210ENST00000584997 TRIOBPQ9H2D6 2365 aa13.05□□□□□ -0.32
CASC3-210ENST00000584997 GNRH1P01148 92 aa13.05□□□□□ -0.32
CASC3-210ENST00000584997 IFIT1P09914 478 aaKnown RBP13.05□□□□□ -0.32
CASC3-210ENST00000584997 PPIL2Q13356 520 aa13.05□□□□□ -0.32
CASC3-210ENST00000584997 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
CASC3-210ENST00000584997 VGLL2Q8N8G2 317 aa13.05□□□□□ -0.32
CASC3-210ENST00000584997 KLHDC4Q8TBB5 520 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms