RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 VPS37DQ86XT2 251 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 MTMR14Q8NCE2 650 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 LPIN2Q92539 896 aa16.56■□□□□ 0.24
SREBF1-223ENST00000584760 F8W031 263 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-223ENST00000584760 SLC5A1P13866 664 aa16.55■□□□□ 0.24
SREBF1-223ENST00000584760 BCAMP50895 628 aa16.55■□□□□ 0.24
SREBF1-223ENST00000584760 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
SREBF1-223ENST00000584760 PNMA6EA0A0J9YXQ4 647 aa16.54■□□□□ 0.24
SREBF1-223ENST00000584760 ATP2B3Q16720 1220 aa16.54■□□□□ 0.24
SREBF1-223ENST00000584760 FBXO46Q6PJ61 603 aaPredicted RBP16.54■□□□□ 0.24
SREBF1-223ENST00000584760 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
SREBF1-223ENST00000584760 CEP126Q9P2H0 1117 aa16.54■□□□□ 0.24
SREBF1-223ENST00000584760 PCDHAC2Q9Y5I4 1007 aa16.54■□□□□ 0.24
SREBF1-223ENST00000584760 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 FKTNO75072 461 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 SREBF2Q12772 1141 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 ITPRIPQ8IWB1 547 aa16.53■□□□□ 0.24
SREBF1-223ENST00000584760 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
SREBF1-223ENST00000584760 AOX1Q06278 1338 aa16.52■□□□□ 0.24
SREBF1-223ENST00000584760 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-223ENST00000584760 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
SREBF1-223ENST00000584760 GRIK5Q16478 980 aa16.52■□□□□ 0.24
SREBF1-223ENST00000584760 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
SREBF1-223ENST00000584760 NOM1Q5C9Z4 860 aaKnown RBP16.52■□□□□ 0.24
SREBF1-223ENST00000584760 ARMC9Q7Z3E5 817 aa16.52■□□□□ 0.24
SREBF1-223ENST00000584760 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
SREBF1-223ENST00000584760 PANK1Q8TE04 598 aa16.52■□□□□ 0.24
SREBF1-223ENST00000584760 TTF2Q9UNY4 1162 aaKnown RBP16.52■□□□□ 0.24
SREBF1-223ENST00000584760 FRAT2O75474 233 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-223ENST00000584760 TBC1D22AQ8WUA7 517 aa16.51■□□□□ 0.23
SREBF1-223ENST00000584760 C1orf115Q9H7X2 142 aa16.51■□□□□ 0.23
SREBF1-223ENST00000584760 SERPINA10Q9UK55 444 aa16.51■□□□□ 0.23
SREBF1-223ENST00000584760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.51■□□□□ 0.23
SREBF1-223ENST00000584760 ADORA1P30542 326 aa16.5■□□□□ 0.23
SREBF1-223ENST00000584760 POLA2Q14181 598 aa16.5■□□□□ 0.23
SREBF1-223ENST00000584760 SSH3Q8TE77 659 aa16.5■□□□□ 0.23
SREBF1-223ENST00000584760 PRMT6Q96LA8 375 aaPredicted RBP16.5■□□□□ 0.23
SREBF1-223ENST00000584760 RCAN3Q9UKA8 241 aa16.5■□□□□ 0.23
SREBF1-223ENST00000584760 ANGEL1Q9UNK9 670 aaKnown RBP16.5■□□□□ 0.23
SREBF1-223ENST00000584760 FZD1Q9UP38 647 aa16.5■□□□□ 0.23
SREBF1-223ENST00000584760 OTOFQ9HC10 1997 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 SSC5DA1L4H1 1573 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 ZBTB22O15209 634 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 PHKA1P46020 1223 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 TFCP2Q12800 502 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 SPRYD7Q5W111 196 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 LAMB1P07942 1786 aa16.49■□□□□ 0.23
SREBF1-223ENST00000584760 A0A1B0GUL7 405 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 CLRN2A0PK11 232 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 MYO1BO43795 1136 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 CRKP46108 304 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 LDLRAD1Q5T700 205 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 SLC10A4Q96EP9 437 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 CFHR5Q9BXR6 569 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 SUGT1Q9Y2Z0 365 aa16.48■□□□□ 0.23
SREBF1-223ENST00000584760 ALDH1A1P00352 501 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 RBM5P52756 815 aaKnown RBP eCLIP16.47■□□□□ 0.23
SREBF1-223ENST00000584760 TIMM10P62072 90 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 HDLBPQ00341 1268 aaKnown RBP16.47■□□□□ 0.23
SREBF1-223ENST00000584760 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 WDR66Q8TBY9 1149 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 DEFB129Q9H1M3 183 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
SREBF1-223ENST00000584760 MAST3O60307 1309 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 SEMA3EO15041 775 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 MS4A1P11836 297 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
SREBF1-223ENST00000584760 CCDC102BQ68D86 513 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 CEP85Q6P2H3 762 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 GCC1Q96CN9 775 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 GNL3LQ9NVN8 582 aaKnown RBP16.46■□□□□ 0.23
SREBF1-223ENST00000584760 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 PPP2R3BQ9Y5P8 575 aa16.46■□□□□ 0.23
SREBF1-223ENST00000584760 PDS5AQ29RF7 1337 aaKnown RBP16.45■□□□□ 0.22
SREBF1-223ENST00000584760 SALL1Q9NSC2 1324 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 MANSC4A6NHS7 340 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-223ENST00000584760 INHBEP58166 350 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
SREBF1-223ENST00000584760 RASGRF1Q13972 1273 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 IFNL1Q8IU54 200 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 TEKT1Q969V4 418 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 XAGE2Q96GT9 111 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 VEZTQ9HBM0 779 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 DENND2AQ9ULE3 1009 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 MAST2Q6P0Q8 1798 aa16.45■□□□□ 0.22
SREBF1-223ENST00000584760 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
SREBF1-223ENST00000584760 OTOP1Q7RTM1 612 aa16.44■□□□□ 0.22
SREBF1-223ENST00000584760 ZDHHC15Q96MV8 337 aa16.44■□□□□ 0.22
SREBF1-223ENST00000584760 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
SREBF1-223ENST00000584760 TDRD3Q9H7E2 651 aaKnown RBP16.44■□□□□ 0.22
SREBF1-223ENST00000584760 ZNF70Q9UC06 446 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-223ENST00000584760 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
SREBF1-223ENST00000584760 PRDX5P30044 214 aa16.43■□□□□ 0.22
SREBF1-223ENST00000584760 HABP4Q5JVS0 413 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms