RNA–Protein interactions for RNA: ENST00000584604.1

TRAPPC8-212, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-212ENST00000584604 TRIM56Q9BRZ2 755 aaKnown RBP9.88□□□□□ -0.83
TRAPPC8-212ENST00000584604 DDX3YO15523 660 aaKnown RBP9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 CYP11A1P05108 521 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 AP3B2Q13367 1082 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 MBTPS1Q14703 1052 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 PLA2G4EQ3MJ16 856 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 CRELD1Q96HD1 420 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 MRS2Q9HD23 443 aa9.87□□□□□ -0.83
TRAPPC8-212ENST00000584604 F8W735 103 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 ST13P50502 369 aaKnown RBP9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 NLRP12P59046 1061 aa9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 DUOXA2Q1HG44 320 aa9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 USP31Q70CQ4 1352 aa9.86□□□□□ -0.83
TRAPPC8-212ENST00000584604 LOC100289279A0A1B0GTE1 492 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 MEGF11A6BM72 1044 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 ENC1O14682 589 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 WISP1O95388 367 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 Q6ZS46 218 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 KIAA1211Q6ZU35 1233 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 SV2BQ7L1I2 683 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 VTI1BQ9UEU0 232 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 USP21Q9UK80 565 aa9.85□□□□□ -0.83
TRAPPC8-212ENST00000584604 VAMP1P23763 118 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 POU4F3Q15319 338 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 TXNRD3Q86VQ6 643 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 UBASH3BQ8TF42 649 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 AKTIPQ9H8T0 292 aa9.84□□□□□ -0.83
TRAPPC8-212ENST00000584604 ZNF157P51786 506 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC8-212ENST00000584604 TAF1CQ15572 869 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC8-212ENST00000584604 TPTE2Q6XPS3 522 aa9.83□□□□□ -0.84
TRAPPC8-212ENST00000584604 ACAD11Q709F0 780 aa9.83□□□□□ -0.84
TRAPPC8-212ENST00000584604 TTF2Q9UNY4 1162 aaKnown RBP9.83□□□□□ -0.84
TRAPPC8-212ENST00000584604 NME2P22392 152 aa9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 NOS3P29474 1203 aa9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 HP1BP3Q5SSJ5 553 aaPredicted RBP9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 NOC4LQ9BVI4 516 aaKnown RBP9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 USP26Q9BXU7 913 aa9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 TMPRSS13Q9BYE2 586 aa9.82□□□□□ -0.84
TRAPPC8-212ENST00000584604 MAOBP27338 520 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 ARNTP27540 789 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 GATA4P43694 442 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 MEI1Q5TIA1 1274 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 PDZD3Q86UT5 571 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 CORO1BQ9BR76 489 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 RUSC1Q9BVN2 902 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 RNF208Q9H0X6 261 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 SAMM50Q9Y512 469 aa9.81□□□□□ -0.84
TRAPPC8-212ENST00000584604 FBXO24O75426 580 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 DLGAP3O95886 979 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 BMP6P22004 513 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 IREB2P48200 963 aaKnown RBP9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 EXOSC6Q5RKV6 272 aaKnown RBP9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 SCARA3Q6AZY7 606 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 SULF2Q8IWU5 870 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 SSBP4Q9BWG4 385 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 EMILIN2Q9BXX0 1053 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 SUGCTQ9HAC7 445 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 KRT82Q9NSB4 513 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 SYNGAP1Q96PV0 1343 aa9.8□□□□□ -0.84
TRAPPC8-212ENST00000584604 IGHA1P01876 353 aa9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 CTSBP07858 339 aa9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 GSTP1P09211 210 aaKnown RBP9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 ZNF252P-AS1Q0IIN9 211 aa9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 LDLRAD1Q5T700 205 aa9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 DZIP1LQ8IYY4 767 aaKnown RBP9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 STK35Q8TDR2 534 aa9.79□□□□□ -0.84
TRAPPC8-212ENST00000584604 PAGE1O75459 146 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 ALX3O95076 343 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 PROCP04070 461 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 CELA3AP09093 270 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 CCDC85BQ15834 202 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 ANKRD34AQ69YU3 496 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 AGGF1Q8N302 714 aaeCLIP9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 SMG8Q8ND04 991 aaKnown RBP9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 CACNA2D2Q9NY47 1150 aa9.78□□□□□ -0.84
TRAPPC8-212ENST00000584604 ECEL1O95672 775 aa9.77□□□□□ -0.85
TRAPPC8-212ENST00000584604 RLBP1P12271 317 aa9.77□□□□□ -0.85
TRAPPC8-212ENST00000584604 SPOCK3Q9BQ16 436 aa9.77□□□□□ -0.85
TRAPPC8-212ENST00000584604 CEP41Q9BYV8 373 aa9.77□□□□□ -0.85
TRAPPC8-212ENST00000584604 CYP8B1Q9UNU6 501 aa9.77□□□□□ -0.85
TRAPPC8-212ENST00000584604 UNCXA6NJT0 531 aa9.76□□□□□ -0.85
TRAPPC8-212ENST00000584604 RPS26P62854 115 aaKnown RBP9.76□□□□□ -0.85
TRAPPC8-212ENST00000584604 LRRC14Q15048 493 aa9.76□□□□□ -0.85
TRAPPC8-212ENST00000584604 MEGF10Q96KG7 1140 aa9.76□□□□□ -0.85
TRAPPC8-212ENST00000584604 CYP4F12Q9HCS2 524 aa9.76□□□□□ -0.85
TRAPPC8-212ENST00000584604 MSTNO14793 375 aa9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 NUTM2GQ5VZR2 741 aa9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 PCNX4Q63HM2 1172 aa9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 MRRFQ96E11 262 aaKnown RBP9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 CCDC86Q9H6F5 360 aaKnown RBP9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 KIAA1522Q9P206 1035 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC8-212ENST00000584604 TIAF1O95411 115 aa9.74□□□□□ -0.85
TRAPPC8-212ENST00000584604 GLB1P16278 677 aa9.74□□□□□ -0.85
TRAPPC8-212ENST00000584604 UVSSAQ2YD98 709 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms