RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 MAGEA8P43361 318 aa13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 EIF5P55010 431 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 SCRN1Q12765 414 aa13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 ARMC3Q5W041 872 aa13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 INTS3Q68E01 1043 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 COPS6Q7L5N1 327 aa13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 RPUSD2Q8IZ73 545 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 BAG1Q99933 345 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
CDK5RAP3-232ENST00000584168 SNUPNO95149 360 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-232ENST00000584168 CCDC183Q5T5S1 534 aa13.71□□□□□ -0.21
CDK5RAP3-232ENST00000584168 XAGE3Q8WTP9 111 aa13.71□□□□□ -0.21
CDK5RAP3-232ENST00000584168 MAP3K2Q9Y2U5 619 aa13.71□□□□□ -0.21
CDK5RAP3-232ENST00000584168 ELP1O95163 1332 aa13.71□□□□□ -0.21
CDK5RAP3-232ENST00000584168 ECM2O94769 699 aaPredicted RBP13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ZRSR2Q15696 482 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SLC5A9Q2M3M2 681 aa13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ZSCAN25Q6NSZ9 544 aa13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 BABAM1Q9NWV8 329 aa13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GPTP24298 496 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MICAL1Q8TDZ2 1067 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SLC4A9Q96Q91 983 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MAF1Q9H063 256 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NBPF26B4DH59 902 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ERVV-2B6SEH9 535 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SMARCA5O60264 1052 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SASH3O75995 380 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SEC31AO94979 1220 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SDSP20132 328 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CD151P48509 253 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 FOXD4L5Q5VV16 416 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NUTM1Q86Y26 1132 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ZGPATQ8N5A5 531 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NBPF15Q8N660 670 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 FOXD4L4Q8WXT5 416 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GJD4Q96KN9 370 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GOPCQ9HD26 462 aa13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CHCHD3Q9NX63 227 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TBC1D8O95759 1140 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GLI3P10071 1580 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ANKRD18AQ8IVF6 992 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DRAXINQ8NBI3 349 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CCDC34Q96HJ3 373 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 RTN2O75298 545 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MRC1P22897 1456 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SIPA1L3O60292 1781 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CEP85Q6P2H3 762 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CLIP2Q9UDT6 1046 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PROCA1Q8NCQ7 364 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ACRBPQ8NEB7 543 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PCDHGA4Q9Y5G9 962 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 HEG1Q9ULI3 1381 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 KDM3BQ7LBC6 1761 aa13.68□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ST18O60284 1047 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CHMLP26374 656 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 FBXW10Q5XX13 1052 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 QTRT2Q9H974 415 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ADCY9O60503 1353 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GADD45BO75293 160 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 RDXP35241 583 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DRC7Q8IY82 874 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 L2HGDHQ9H9P8 463 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ORC3Q9UBD5 711 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 GCKP35557 465 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PARD3BQ8TEW8 1205 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 CRACR2AQ9BSW2 395 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 USP44Q9H0E7 712 aa13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DDX21Q9NR30 783 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK5RAP3-232ENST00000584168 USP27XA6NNY8 438 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 TMCO5BA8MYB1 307 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 MX1P20591 662 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 LIG3P49916 1009 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 SNX1Q13596 522 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 LRRN4CLQ8ND94 238 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 RMI1Q9H9A7 625 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 ODF2LQ9ULJ1 636 aa13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 PECAM1P16284 738 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-232ENST00000584168 DDX11Q96FC9 970 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms