RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 NOS3P29474 1203 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 ITGAEP38570 1179 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 IREB2P48200 963 aaKnown RBP6.8□□□□□ -1.32
SKA2-210ENST00000584089 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
SKA2-210ENST00000584089 PPP2R3AQ06190 1150 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 KIAA1211Q6ZU35 1233 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 ACAD11Q709F0 780 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 UBASH3BQ8TF42 649 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 CEP44Q9C0F1 390 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 NRSN2Q9GZP1 204 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 TMEM39AQ9NV64 488 aa6.8□□□□□ -1.32
SKA2-210ENST00000584089 LOC100289279A0A1B0GTE1 492 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 PROCP04070 461 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 Q6ZS46 218 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 GIPC2Q8TF65 315 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 USP26Q9BXU7 913 aa6.79□□□□□ -1.32
SKA2-210ENST00000584089 MEGF11A6BM72 1044 aa6.78□□□□□ -1.32
SKA2-210ENST00000584089 ALX3O95076 343 aa6.78□□□□□ -1.32
SKA2-210ENST00000584089 POU4F3Q15319 338 aa6.78□□□□□ -1.32
SKA2-210ENST00000584089 TRIM56Q9BRZ2 755 aaKnown RBP6.78□□□□□ -1.32
SKA2-210ENST00000584089 RUSC1Q9BVN2 902 aa6.78□□□□□ -1.32
SKA2-210ENST00000584089 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
SKA2-210ENST00000584089 GPN3Q9UHW5 284 aaPredicted RBP6.78□□□□□ -1.32
SKA2-210ENST00000584089 SORBS3O60504 671 aa6.77□□□□□ -1.33
SKA2-210ENST00000584089 MAOBP27338 520 aa6.77□□□□□ -1.33
SKA2-210ENST00000584089 ZNF157P51786 506 aaPredicted RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 HP1BP3Q5SSJ5 553 aaPredicted RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 DZIP1LQ8IYY4 767 aaKnown RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 AGGF1Q8N302 714 aaeCLIP6.77□□□□□ -1.33
SKA2-210ENST00000584089 NECAB3Q96P71 396 aaPredicted RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 CORO1BQ9BR76 489 aa6.77□□□□□ -1.33
SKA2-210ENST00000584089 SSBP4Q9BWG4 385 aaPredicted RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 BCL11AQ9H165 835 aa6.77□□□□□ -1.33
SKA2-210ENST00000584089 CCDC9Q9Y3X0 531 aaKnown RBP6.77□□□□□ -1.33
SKA2-210ENST00000584089 GLB1P16278 677 aa6.76□□□□□ -1.33
SKA2-210ENST00000584089 ZNF16P17020 682 aaPredicted RBP6.76□□□□□ -1.33
SKA2-210ENST00000584089 EXOSC6Q5RKV6 272 aaKnown RBP6.76□□□□□ -1.33
SKA2-210ENST00000584089 FAM161BQ96MY7 647 aa6.76□□□□□ -1.33
SKA2-210ENST00000584089 TMPRSS13Q9BYE2 586 aa6.76□□□□□ -1.33
SKA2-210ENST00000584089 CEP41Q9BYV8 373 aa6.76□□□□□ -1.33
SKA2-210ENST00000584089 MRS2Q9HD23 443 aa6.76□□□□□ -1.33
SKA2-210ENST00000584089 RBM47A0AV96 593 aaKnown RBP6.75□□□□□ -1.33
SKA2-210ENST00000584089 DLGAP3O95886 979 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 TPTE2Q6XPS3 522 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 SV2BQ7L1I2 683 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 MEGF10Q96KG7 1140 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 SUGCTQ9HAC7 445 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 TPSG1Q9NRR2 321 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 TTF2Q9UNY4 1162 aaKnown RBP6.75□□□□□ -1.33
SKA2-210ENST00000584089 SAMM50Q9Y512 469 aa6.75□□□□□ -1.33
SKA2-210ENST00000584089 ENC1O14682 589 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 FBXO24O75426 580 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 NME2P22392 152 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 ARNTP27540 789 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 DOC2BQ14184 412 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 NUTM2GQ5VZR2 741 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 SULF2Q8IWU5 870 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 SMG8Q8ND04 991 aaKnown RBP6.74□□□□□ -1.33
SKA2-210ENST00000584089 RGS22Q8NE09 1264 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 CRELD1Q96HD1 420 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 EMILIN2Q9BXX0 1053 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 CYP4F12Q9HCS2 524 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 VTI1BQ9UEU0 232 aa6.74□□□□□ -1.33
SKA2-210ENST00000584089 USP31Q70CQ4 1352 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 ECEL1O95672 775 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 CTSBP07858 339 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 GSTP1P09211 210 aaKnown RBP6.73□□□□□ -1.33
SKA2-210ENST00000584089 CTSHP09668 335 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 ST13P50502 369 aaKnown RBP6.73□□□□□ -1.33
SKA2-210ENST00000584089 HNRNPUQ00839 825 aaKnown RBP eCLIP6.73□□□□□ -1.33
SKA2-210ENST00000584089 UVSSAQ2YD98 709 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 FDX2Q6P4F2 183 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 UBL7Q96S82 380 aaPredicted RBP6.73□□□□□ -1.33
SKA2-210ENST00000584089 KRT82Q9NSB4 513 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 SYNGAP1Q96PV0 1343 aa6.73□□□□□ -1.33
SKA2-210ENST00000584089 SART1O43290 800 aaKnown RBP6.72□□□□□ -1.33
SKA2-210ENST00000584089 TIAF1O95411 115 aa6.72□□□□□ -1.33
SKA2-210ENST00000584089 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
SKA2-210ENST00000584089 PDE3AQ14432 1141 aa6.72□□□□□ -1.33
SKA2-210ENST00000584089 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
SKA2-210ENST00000584089 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
SKA2-210ENST00000584089 TP53INP1Q96A56 240 aa6.72□□□□□ -1.33
SKA2-210ENST00000584089 FAM46AQ96IP4 442 aaKnown RBP6.72□□□□□ -1.33
SKA2-210ENST00000584089 PAGE1O75459 146 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 BMP6P22004 513 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 LRRC14Q15048 493 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 MEI1Q5TIA1 1274 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 SCARA3Q6AZY7 606 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 C12orf50Q8NA57 414 aaPredicted RBP6.71□□□□□ -1.34
SKA2-210ENST00000584089 STK35Q8TDR2 534 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 CCDC86Q9H6F5 360 aaKnown RBP6.71□□□□□ -1.34
SKA2-210ENST00000584089 RAD18Q9NS91 495 aa6.71□□□□□ -1.34
SKA2-210ENST00000584089 CELA3AP09093 270 aa6.7□□□□□ -1.34
SKA2-210ENST00000584089 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
SKA2-210ENST00000584089 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
SKA2-210ENST00000584089 PREPP48147 710 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms