RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 MYH13Q9UKX3 1938 aa13.26□□□□□ -0.29
TOP3A-216ENST00000583804 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 SCNN1DP51172 638 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
TOP3A-216ENST00000583804 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 DPF2Q92785 391 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 GMLQ99445 158 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■□ 21.2
TOP3A-216ENST00000583804 CNOT7Q9UIV1 285 aaKnown RBP13.25□□□□□ -0.29
TOP3A-216ENST00000583804 HDAC9Q9UKV0 1011 aa13.25□□□□□ -0.29
TOP3A-216ENST00000583804 H7C1D1 291 aa13.24□□□□□ -0.29
TOP3A-216ENST00000583804 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-216ENST00000583804 RBM5P52756 815 aaKnown RBP eCLIP13.24□□□□□ -0.29
TOP3A-216ENST00000583804 MECOMQ03112 1051 aa13.24□□□□□ -0.29
TOP3A-216ENST00000583804 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
TOP3A-216ENST00000583804 SLC9C2Q5TAH2 1124 aa13.24□□□□□ -0.29
TOP3A-216ENST00000583804 NAA16Q6N069 864 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-216ENST00000583804 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
TOP3A-216ENST00000583804 ZNF526Q8TF50 670 aaPredicted RBP13.24□□□□□ -0.29
TOP3A-216ENST00000583804 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 GSTO1P78417 241 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 LRRFIP1Q32MZ4 808 aaKnown RBP13.23□□□□□ -0.29
TOP3A-216ENST00000583804 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
TOP3A-216ENST00000583804 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 MICALL2Q8IY33 904 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 NSUN4Q96CB9 384 aaKnown RBP13.23□□□□□ -0.29
TOP3A-216ENST00000583804 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 MAST3O60307 1309 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 PDE6AP16499 860 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 CYP7A1P22680 504 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 AK9Q5TCS8 1911 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 SLF2Q8IX21 1173 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
TOP3A-216ENST00000583804 PSME4Q14997 1843 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
TOP3A-216ENST00000583804 CHGBP05060 677 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 LDHCP07864 332 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 EPS15P42566 896 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 CRKP46108 304 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 CFAP100Q494V2 611 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 SLFNL1Q499Z3 407 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 SAMD7Q7Z3H4 446 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 ZNF384Q8TF68 577 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 ANP32EQ9BTT0 268 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 MYOZ2Q9NPC6 264 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 SERPINA10Q9UK55 444 aa13.22□□□□□ -0.29
TOP3A-216ENST00000583804 ZNF532Q9HCE3 1301 aa13.21□□□□□ -0.29
TOP3A-216ENST00000583804 IGSF3O75054 1194 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 CDC45O75419 566 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 SEC24BO95487 1268 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 ZFYP08048 801 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 ADD2P35612 726 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 HDLBPQ00341 1268 aaKnown RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 DLGAP5Q15398 846 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 L3MBTL3Q96JM7 780 aaPredicted RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 NOL10Q9BSC4 688 aaKnown RBP13.21□□□□□ -0.3
TOP3A-216ENST00000583804 MRIQ9BWK5 157 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 RRAGCQ9HB90 399 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 HACL1Q9UJ83 578 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 PCDHAC2Q9Y5I4 1007 aa13.21□□□□□ -0.3
TOP3A-216ENST00000583804 MROH7-TTC4A0A0A0MT08 1334 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 MMP14P50281 582 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
TOP3A-216ENST00000583804 UBE3CQ15386 1083 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 MIGA1Q8NAN2 632 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 CNKSR2Q8WXI2 1034 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
TOP3A-216ENST00000583804 DIAPH3Q9NSV4 1193 aa13.2□□□□□ -0.3
TOP3A-216ENST00000583804 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-216ENST00000583804 EPHX2P34913 555 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 KIF4BQ2VIQ3 1234 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 ADGRA1Q86SQ6 560 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-216ENST00000583804 PRMT6Q96LA8 375 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-216ENST00000583804 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 BACH2Q9BYV9 841 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 AATFQ9NY61 560 aaKnown RBP eCLIP13.19□□□□□ -0.3
TOP3A-216ENST00000583804 DAGLAQ9Y4D2 1042 aa13.19□□□□□ -0.3
TOP3A-216ENST00000583804 MYO5AQ9Y4I1 1855 aaKnown RBP13.18□□□□□ -0.3
TOP3A-216ENST00000583804 TCRBV5S4A2TA0A5A2 114 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 HIP1O00291 1037 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 BAG3O95817 575 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 EGFRP00533 1210 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 VEGFAP15692 232 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-216ENST00000583804 BTDP43251 543 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 TMED8Q6PL24 325 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-216ENST00000583804 TRPM4Q8TD43 1214 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 APPBP2Q92624 585 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 NMRK2Q9NPI5 230 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 GAKO14976 1311 aa13.18□□□□□ -0.3
TOP3A-216ENST00000583804 GPR75-ASB3A0A0A6YYF3 556 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
TOP3A-216ENST00000583804 SPDYE2BA6NHP3 402 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms