RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 URI1O94763 535 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-214ENST00000582981 CTR9Q6PD62 1173 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-214ENST00000582981 ATP2B1P20020 1258 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 CABP4P57796 275 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 FAM160A1Q05DH4 1040 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 NOM1Q5C9Z4 860 aaKnown RBP12.14□□□□□ -0.47
TOP3A-214ENST00000582981 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
TOP3A-214ENST00000582981 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
TOP3A-214ENST00000582981 CARMIL3Q8ND23 1372 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NBPF26B4DH59 902 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NBPF15Q8N660 670 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 PHKBQ93100 1093 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 ZSCAN16Q9H4T2 348 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 UTYO14607 1347 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 CPLX1O14810 134 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NEMFO60524 1076 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 LEKR1Q6ZMV7 388 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NBPF11Q86T75 865 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 C8orf76Q96K31 380 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NCAPGQ9BPX3 1015 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 DEF6Q9H4E7 631 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
TOP3A-214ENST00000582981 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
TOP3A-214ENST00000582981 NFAT5O94916 1531 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 SNAP23O00161 211 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 SASH3O75995 380 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 BRD2P25440 801 aaKnown RBP12.12□□□□□ -0.47
TOP3A-214ENST00000582981 PSEN1P49768 467 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 DPF2Q92785 391 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 PUS7LQ9H0K6 701 aaKnown RBP12.12□□□□□ -0.47
TOP3A-214ENST00000582981 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 CRYBG1Q9Y4K1 1723 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 FAM89AQ96GI7 184 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 ADAM21Q9UKJ8 722 aa12.12□□□□□ -0.47
TOP3A-214ENST00000582981 KDM3BQ7LBC6 1761 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 KIF2AO00139 706 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 PRC1O43663 620 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 GPTP24298 496 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 LRP10Q7Z4F1 713 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 FBXO18Q8NFZ0 1043 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 GOLGA5Q8TBA6 731 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 MROH7-TTC4A0A0A0MT08 1334 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ANKARQ7Z5J8 1434 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 MED1Q15648 1581 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 A0A0G2JS52 829 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ZRANB2O95218 330 aaKnown RBP eCLIP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ZAP70P43403 619 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 FOXO4P98177 505 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 PPP1R13BQ96KQ4 1090 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ZNF396Q96N95 335 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 FGAP02671 866 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 ZNF827Q17R98 1081 aa12.11□□□□□ -0.47
TOP3A-214ENST00000582981 E4F1Q66K89 784 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
TOP3A-214ENST00000582981 TMEM232C9JQI7 657 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 CLGNO14967 610 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 FOXN1O15353 648 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 WDHD1O75717 1129 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-214ENST00000582981 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
TOP3A-214ENST00000582981 EVCP57679 992 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 PNOCQ13519 176 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 TTC39AQ5SRH9 613 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 ZMYM1Q5SVZ6 1142 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 LINC00301Q8NCQ3 95 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 VPS18Q9P253 973 aa12.1□□□□□ -0.47
TOP3A-214ENST00000582981 SPTLC2O15270 562 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 FOXP2O15409 715 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 CT47A1Q5JQC4 288 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 HELBQ8NG08 1087 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-214ENST00000582981 MRFAP1L1Q96HT8 127 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 PLEKHA4Q9H4M7 779 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 MEGF6O75095 1541 aa12.09□□□□□ -0.47
TOP3A-214ENST00000582981 ZNF202O95125 648 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms