RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	PPP1R12B	O60237	982 aa	Predicted RBP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	ELN	P15502	786 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	POU3F3	P20264	500 aa	Predicted RBP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	PUM1	Q14671	1186 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	IER5L	Q5T953	404 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	DZIP3	Q86Y13	1208 aa	Known RBP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	FAM178B	Q8IXR5	827 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	ANKRD13A	Q8IZ07	590 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	RNPC3	Q96LT9	517 aa	Known RBP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	NYX	Q9GZU5	481 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	NIP7	Q9Y221	180 aa	Known RBP eCLIP	7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	COL4A3	Q01955	1670 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	NUP98	P52948	1817 aa		7.08	□□□□□ -1.28
MSI2-216	ENST00000582772	LOC400499	M0QZD8	3231 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	ANKRD17	O75179	2603 aa	Known RBP	7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	SPTBN2	O15020	2390 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	NBPF26	B4DH59	902 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	ECE2	O60344	883 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	USP17L8	P0C7I0	530 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	FCGRT	P55899	365 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	NBPF9	Q3BBW0	867 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	AMOT	Q4VCS5	1084 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	OPTN	Q96CV9	577 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	DBNDD1	Q9H9R9	158 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	SLC52A2	Q9HAB3	445 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	KCNQ5	Q9NR82	932 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	FAM86C1	Q9NVL1	165 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	PRKAG2	Q9UGJ0	569 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	GABRQ	Q9UN88	632 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	FZD1	Q9UP38	647 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	AK9	Q5TCS8	1911 aa		7.07	□□□□□ -1.28
MSI2-216	ENST00000582772	WNT10B	O00744	389 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	BBOX1	O75936	387 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	IGFBP4	P22692	258 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	NBL1	P41271	181 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	FLT3LG	P49771	235 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	PLEKHO1	Q53GL0	409 aa	Predicted RBP	7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	RSBN1L	Q6PCB5	846 aa	Predicted RBP	7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	TEX13A	Q9BXU3	409 aa	Predicted RBP	7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	PPP2R3B	Q9Y5P8	575 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	TEP1	Q99973	2627 aa	Known RBP	7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	WDFY3	Q8IZQ1	3526 aa		7.06	□□□□□ -1.28
MSI2-216	ENST00000582772	SIPA1L3	O60292	1781 aa	Predicted RBP	7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	GAK	O14976	1311 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	ABCC4	O15439	1325 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	CYSRT1	A8MQ03	144 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	TCERG1	O14776	1098 aa	Known RBP	7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	IREB2	P48200	963 aa	Known RBP	7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	MMP14	P50281	582 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	WASHC4	Q2M389	1173 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	RIC3	Q7Z5B4	369 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	SLC12A5	Q9H2X9	1139 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	DLL3	Q9NYJ7	618 aa		7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	EP300	Q09472	2414 aa	Predicted RBP	7.05	□□□□□ -1.28
MSI2-216	ENST00000582772	SOWAHB	A6NEL2	793 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	BTBD19	C9JJ37	291 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	HMGCR	P04035	888 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	BCR	P11274	1271 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	GTF2E1	P29083	439 aa	Predicted RBP	7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	IRS1	P35568	1242 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	SLC39A6	Q13433	755 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	NPM2	Q86SE8	214 aa	Known RBP	7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	HLA-C	Q95604	372 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	PBX4	Q9BYU1	374 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	HMX1	Q9NP08	348 aa	Predicted RBP	7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	HEG1	Q9ULI3	1381 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	NBEA	Q8NFP9	2946 aa		7.04	□□□□□ -1.28
MSI2-216	ENST00000582772	CETP	P11597	493 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	C1orf141	Q5JVX7	400 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	TMC4	Q7Z404	712 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	ATOH1	Q92858	354 aa	Predicted RBP	7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	BAD	Q92934	168 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	FSD1	Q9BTV5	496 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	CPA4	Q9UI42	421 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	PTPN13	Q12923	2485 aa		7.03	□□□□□ -1.28
MSI2-216	ENST00000582772	USP2	O75604	605 aa	Predicted RBP	7.02	□□□□□ -1.29
MSI2-216	ENST00000582772	NUBP1	P53384	320 aa		7.02	□□□□□ -1.29
MSI2-216	ENST00000582772	MAP3K21	Q5TCX8	1036 aa		7.02	□□□□□ -1.29
MSI2-216	ENST00000582772	PODN	Q7Z5L7	613 aa		7.02	□□□□□ -1.29
MSI2-216	ENST00000582772	PUS7	Q96PZ0	661 aa	Known RBP	7.02	□□□□□ -1.29
MSI2-216	ENST00000582772	PLXNB2	O15031	1838 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	FYB1	O15117	783 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	SKIV2L	Q15477	1246 aa	Known RBP	7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	C3orf67	Q6ZVT6	689 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	ADSSL1	Q8N142	457 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	ZBED3	Q96IU2	234 aa	Predicted RBP	7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	DEFB129	Q9H1M3	183 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	EMILIN1	Q9Y6C2	1016 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	ARAP2	Q8WZ64	1704 aa		7.01	□□□□□ -1.29
MSI2-216	ENST00000582772	PBX2	P40425	430 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	EPHB4	P54760	987 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	SUPT20HL1	Q3ZLR7	823 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	RASIP1	Q5U651	963 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	TMC1	Q8TDI8	760 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	ELP3	Q9H9T3	547 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	JAG2	Q9Y219	1238 aa		7	□□□□□ -1.29
MSI2-216	ENST00000582772	MTCH2	Q9Y6C9	303 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms