RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
NUP85-217ENST00000581335 KCNJ4P48050 445 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 RGS19P49795 217 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 CLCN6P51797 869 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 FOXO4P98177 505 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 EVX2Q03828 476 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 IER5LQ5T953 404 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 PRAMEF18Q5VWM3 479 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
NUP85-217ENST00000581335 CD209Q9NNX6 404 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 HDAC9Q9UKV0 1011 aa11.14□□□□□ -0.63
NUP85-217ENST00000581335 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
NUP85-217ENST00000581335 F6X3S4 739 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 OSBPP22059 807 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 GTF2IP78347 998 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
NUP85-217ENST00000581335 TMEM92Q6UXU6 159 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 MOB2Q70IA6 237 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 KIAA0825Q8IV33 1275 aa11.13□□□□□ -0.63
NUP85-217ENST00000581335 IRS2Q9Y4H2 1338 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 SNAP23O00161 211 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 TAF5LO75529 589 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 SASH1O94885 1247 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 NF2P35240 595 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
NUP85-217ENST00000581335 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
NUP85-217ENST00000581335 GRM8O00222 908 aa11.11□□□□□ -0.63
NUP85-217ENST00000581335 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
NUP85-217ENST00000581335 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
NUP85-217ENST00000581335 LMBR1LQ6UX01 489 aa11.11□□□□□ -0.63
NUP85-217ENST00000581335 APOBEC3FQ8IUX4 373 aaKnown RBP11.11□□□□□ -0.63
NUP85-217ENST00000581335 HELBQ8NG08 1087 aaPredicted RBP11.11□□□□□ -0.63
NUP85-217ENST00000581335 OXER1Q8TDS5 423 aa11.11□□□□□ -0.63
NUP85-217ENST00000581335 ZBED3Q96IU2 234 aaPredicted RBP11.11□□□□□ -0.63
NUP85-217ENST00000581335 IL1R1P14778 569 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 TM4SF4P48230 202 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 CCDC57Q2TAC2 916 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 EPHA10Q5JZY3 1008 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 LDHAL6AQ6ZMR3 332 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 FAM9BQ8IZU0 186 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 MTMR14Q8NCE2 650 aa11.1□□□□□ -0.63
NUP85-217ENST00000581335 C9orf78Q9NZ63 289 aaPredicted RBP11.1□□□□□ -0.63
NUP85-217ENST00000581335 GRXCR2A6NFK2 248 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 IRF6O14896 467 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 PLIN1O60240 522 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 ALDH1L1O75891 902 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 FKBP1AP62942 108 aaKnown RBP11.09□□□□□ -0.63
NUP85-217ENST00000581335 MAP3K9P80192 1104 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 MAP2K5Q13163 448 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 DLGAP5Q15398 846 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 ARMC9Q7Z3E5 817 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 ZNF804AQ7Z570 1209 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 CERS5Q8N5B7 392 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
NUP85-217ENST00000581335 CNNM1Q9NRU3 951 aa11.09□□□□□ -0.63
NUP85-217ENST00000581335 COL1A1P02452 1464 aaPredicted RBP11.08□□□□□ -0.64
NUP85-217ENST00000581335 PTPN12Q05209 780 aaKnown RBP11.08□□□□□ -0.64
NUP85-217ENST00000581335 PRKG1Q13976 671 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 AMHR2Q16671 573 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 LDLRAD1Q5T700 205 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 CTU1Q7Z7A3 348 aaKnown RBP11.08□□□□□ -0.64
NUP85-217ENST00000581335 HOMEZQ8IX15 550 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 SRCIN1Q9C0H9 1055 aa11.08□□□□□ -0.64
NUP85-217ENST00000581335 F8W031 263 aaPredicted RBP11.07□□□□□ -0.64
NUP85-217ENST00000581335 MYO1BO43795 1136 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 TBC1D8O95759 1140 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 CFAP100Q494V2 611 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 PRMT6Q96LA8 375 aaPredicted RBP11.07□□□□□ -0.64
NUP85-217ENST00000581335 DEFB129Q9H1M3 183 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 ANGEL1Q9UNK9 670 aaKnown RBP11.07□□□□□ -0.64
NUP85-217ENST00000581335 PCDHAC2Q9Y5I4 1007 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 PPP2R3BQ9Y5P8 575 aa11.07□□□□□ -0.64
NUP85-217ENST00000581335 SREBF2Q12772 1141 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 MAP3K11Q16584 847 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 KAZALD1Q96I82 304 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 SUCLG2Q96I99 432 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 UTYO14607 1347 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
NUP85-217ENST00000581335 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 GPR25O00155 361 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 PPP1R12BO60237 982 aaPredicted RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 FECHP22830 423 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 HIBADHP31937 336 aaKnown RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 RBM5P52756 815 aaKnown RBP eCLIP11.05□□□□□ -0.64
NUP85-217ENST00000581335 PKN2Q16513 984 aaKnown RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 NOM1Q5C9Z4 860 aaKnown RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 SPRYD7Q5W111 196 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 TDRD7Q8NHU6 1098 aaKnown RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 ZNF296Q8WUU4 475 aaPredicted RBP11.05□□□□□ -0.64
NUP85-217ENST00000581335 SLC10A4Q96EP9 437 aa11.05□□□□□ -0.64
NUP85-217ENST00000581335 CFHR5Q9BXR6 569 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms