RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 TAF1DQ9H5J8 278 aaPredicted RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 ABCF2Q9UG63 623 aa18.4■□□□□ 0.54
MKS1-210ENST00000581180 TTF2Q9UNY4 1162 aaKnown RBP18.4■□□□□ 0.54
MKS1-210ENST00000581180 AOX1Q06278 1338 aa18.4■□□□□ 0.54
MKS1-210ENST00000581180 H7C1D1 291 aa18.39■□□□□ 0.53
MKS1-210ENST00000581180 LDHBP07195 334 aaKnown RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 EPHX2P34913 555 aa18.39■□□□□ 0.53
MKS1-210ENST00000581180 SPTY2D1Q68D10 685 aaPredicted RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 ERICH6Q7L0X2 663 aa18.39■□□□□ 0.53
MKS1-210ENST00000581180 EDC3Q96F86 508 aaKnown RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 DNAJC2Q99543 621 aaKnown RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 MRIQ9BWK5 157 aa18.39■□□□□ 0.53
MKS1-210ENST00000581180 GPBP1L1Q9HC44 474 aaPredicted RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 ADARB2Q9NS39 739 aaKnown RBP18.39■□□□□ 0.53
MKS1-210ENST00000581180 GOLIM4O00461 696 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 IGSF3O75054 1194 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 EGFRP00533 1210 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 HDLBPQ00341 1268 aaKnown RBP18.38■□□□□ 0.53
MKS1-210ENST00000581180 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 TRPM4Q8TD43 1214 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 ZNF384Q8TF68 577 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 ZBED3Q96IU2 234 aaPredicted RBP18.38■□□□□ 0.53
MKS1-210ENST00000581180 MYOZ2Q9NPC6 264 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 PAG1Q9NWQ8 432 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 HDAC9Q9UKV0 1011 aa18.38■□□□□ 0.53
MKS1-210ENST00000581180 HIRAP54198 1017 aaPredicted RBP18.37■□□□□ 0.53
MKS1-210ENST00000581180 TTF1Q15361 905 aaPredicted RBP18.37■□□□□ 0.53
MKS1-210ENST00000581180 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
MKS1-210ENST00000581180 NSUN4Q96CB9 384 aaKnown RBP18.37■□□□□ 0.53
MKS1-210ENST00000581180 SERPINA10Q9UK55 444 aa18.37■□□□□ 0.53
MKS1-210ENST00000581180 MAST3O60307 1309 aa18.37■□□□□ 0.53
MKS1-210ENST00000581180 KIF3CO14782 793 aa18.36■□□□□ 0.53
MKS1-210ENST00000581180 TBC1D10BQ4KMP7 808 aaPredicted RBP18.36■□□□□ 0.53
MKS1-210ENST00000581180 USP50Q70EL3 339 aaPredicted RBP18.36■□□□□ 0.53
MKS1-210ENST00000581180 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
MKS1-210ENST00000581180 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
MKS1-210ENST00000581180 CRKP46108 304 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 MECOMQ03112 1051 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 DIXDC1Q155Q3 683 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 KIF4BQ2VIQ3 1234 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 HHIPL2Q6UWX4 724 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 FAM163AQ96GL9 167 aaPredicted RBP18.35■□□□□ 0.53
MKS1-210ENST00000581180 RAI14Q9P0K7 980 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
MKS1-210ENST00000581180 GAKO14976 1311 aa18.34■□□□□ 0.53
MKS1-210ENST00000581180 WNT10BO00744 389 aa18.34■□□□□ 0.53
MKS1-210ENST00000581180 RBM26Q5T8P6 1007 aaKnown RBP18.34■□□□□ 0.53
MKS1-210ENST00000581180 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
MKS1-210ENST00000581180 DZIP1Q86YF9 867 aaKnown RBP18.34■□□□□ 0.53
MKS1-210ENST00000581180 TEKT1Q969V4 418 aa18.34■□□□□ 0.53
MKS1-210ENST00000581180 ZDHHC15Q96MV8 337 aa18.34■□□□□ 0.53
MKS1-210ENST00000581180 SPDYE2BA6NHP3 402 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 IDH1O75874 414 aaKnown RBP18.33■□□□□ 0.52
MKS1-210ENST00000581180 MAP4K4O95819 1239 aaPredicted RBP18.33■□□□□ 0.52
MKS1-210ENST00000581180 SPDYE6P0CI01 402 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 MAP3K12Q12852 859 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 PRMT6Q96LA8 375 aaPredicted RBP18.33■□□□□ 0.52
MKS1-210ENST00000581180 DAGLAQ9Y4D2 1042 aa18.33■□□□□ 0.52
MKS1-210ENST00000581180 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
MKS1-210ENST00000581180 POTEJP0CG39 1038 aa18.32■□□□□ 0.52
MKS1-210ENST00000581180 NBPF9Q3BBW0 867 aa18.32■□□□□ 0.52
MKS1-210ENST00000581180 APOBEC3HQ6NTF7 200 aaKnown RBP18.32■□□□□ 0.52
MKS1-210ENST00000581180 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
MKS1-210ENST00000581180 PGAP2Q9UHJ9 254 aa18.32■□□□□ 0.52
MKS1-210ENST00000581180 MROH7-TTC4A0A0A0MT08 1334 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
MKS1-210ENST00000581180 PDE6AP16499 860 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 GSTO1P78417 241 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 EAPPQ56P03 285 aaPredicted RBP18.31■□□□□ 0.52
MKS1-210ENST00000581180 TTC22Q5TAA0 569 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 NAA16Q6N069 864 aaPredicted RBP18.31■□□□□ 0.52
MKS1-210ENST00000581180 ADGRA1Q86SQ6 560 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 SLF2Q8IX21 1173 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 MAGEB6Q8N7X4 407 aa18.31■□□□□ 0.52
MKS1-210ENST00000581180 FOCADQ5VW36 1801 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 GPR75-ASB3A0A0A6YYF3 556 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 LDHCP07864 332 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
MKS1-210ENST00000581180 ADD2P35612 726 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
MKS1-210ENST00000581180 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
MKS1-210ENST00000581180 EVI5LQ96CN4 794 aa18.3■□□□□ 0.52
MKS1-210ENST00000581180 CHGBP05060 677 aa18.29■□□□□ 0.52
MKS1-210ENST00000581180 SLC9C2Q5TAH2 1124 aa18.29■□□□□ 0.52
MKS1-210ENST00000581180 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
MKS1-210ENST00000581180 GTF3C3Q9Y5Q9 886 aa18.29■□□□□ 0.52
MKS1-210ENST00000581180 CYP7A1P22680 504 aa18.28■□□□□ 0.52
MKS1-210ENST00000581180 UBE3CQ15386 1083 aa18.28■□□□□ 0.52
MKS1-210ENST00000581180 SPDYE2Q495Y8 402 aa18.28■□□□□ 0.52
MKS1-210ENST00000581180 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
MKS1-210ENST00000581180 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■■■■■ 38.5
MKS1-210ENST00000581180 TDRD3Q9H7E2 651 aaKnown RBP18.28■□□□□ 0.52
MKS1-210ENST00000581180 ZNF532Q9HCE3 1301 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms