RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 GJA8P48165 433 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 TNFAIP1Q13829 316 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 KSR2Q6VAB6 950 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 C15orf52Q6ZUT6 534 aaKnown RBP11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 TRIM47Q96LD4 638 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 HTATIP2Q9BUP3 242 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 CSADQ9Y600 493 aa11.91□□□□□ -0.5
SMARCD2-208ENST00000580054 FARP2O94887 1054 aaPredicted RBP11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 GJB1P08034 283 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 OSBPP22059 807 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 GRK4P32298 578 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 CASP7P55210 303 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 ZNF804AQ7Z570 1209 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 TSPYL6Q8N831 410 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 PLA2G12BQ9BX93 195 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 SRRDQ9UH36 339 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 RIPOR2Q9Y4F9 1068 aa11.9□□□□□ -0.5
SMARCD2-208ENST00000580054 MYPNQ86TC9 1320 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 IRF6O14896 467 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 GNRH1P01148 92 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 CSF1RP07333 972 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 CETPP11597 493 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 PSMC4P43686 418 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 MNX1P50219 401 aaPredicted RBP11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 CACNB3P54284 484 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 PRMT2P55345 433 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 NEXNQ0ZGT2 675 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 DDX10Q13206 875 aaKnown RBP11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 C17orf99Q6UX52 265 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 G2E3Q7L622 706 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 RAET1EQ8TD07 263 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 ADAMTS8Q9UP79 889 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 NR2E3Q9Y5X4 410 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
SMARCD2-208ENST00000580054 A0A1W2PPC1 479 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 WDHD1O75717 1129 aaPredicted RBP11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 GCKRQ14397 625 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 MFSD14BQ5SR56 506 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 DZIP1LQ8IYY4 767 aaKnown RBP11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 WRNIP1Q96S55 665 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 UNC93B1Q9H1C4 597 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 ZCCHC17Q9NP64 241 aaKnown RBP11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 STAP2Q9UGK3 403 aa11.88□□□□□ -0.51
SMARCD2-208ENST00000580054 FAM205AQ6ZU69 1335 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 FMNL1O95466 1100 aaPredicted RBP11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 CRKP46108 304 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 GNAI1P63096 354 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 PRKCZQ05513 592 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 PPIL2Q13356 520 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 SNAPC2Q13487 334 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 GRIK5Q16478 980 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 Q7L0L9 218 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 ERO1BQ86YB8 467 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 BIN2Q9UBW5 565 aaPredicted RBP11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 SERPINA10Q9UK55 444 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 AK9Q5TCS8 1911 aa11.87□□□□□ -0.51
SMARCD2-208ENST00000580054 PLIN1O60240 522 aa11.86□□□□□ -0.51
SMARCD2-208ENST00000580054 EVI5O60447 810 aa11.86□□□□□ -0.51
SMARCD2-208ENST00000580054 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.86□□□□□ -0.51
SMARCD2-208ENST00000580054 PDHXO00330 501 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 GYG1P46976 350 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 TNNI2P48788 182 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 UBXN2AP68543 259 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 ZNF594Q96JF6 807 aaPredicted RBP11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 CHMP3Q9Y3E7 222 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 PTPRFP10586 1907 aa11.85□□□□□ -0.51
SMARCD2-208ENST00000580054 SGPL1O95470 568 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 HOXD10P28358 340 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 INPP5BP32019 993 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 FOXO4P98177 505 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 MOGSQ13724 837 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 ANKRD23Q86SG2 305 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 TDRD7Q8NHU6 1098 aaKnown RBP11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 COL25A1Q9BXS0 654 aaPredicted RBP11.84□□□□□ -0.51
SMARCD2-208ENST00000580054 DDX60LQ5H9U9 1706 aaKnown RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 APAF1O14727 1248 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 ELNP15502 786 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 CALD1Q05682 793 aaKnown RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 EPHA10Q5JZY3 1008 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 SLAIN1Q8ND83 568 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 DIS3LQ8TF46 1054 aaKnown RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 TSR2Q969E8 191 aaKnown RBP11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
SMARCD2-208ENST00000580054 ZMYND8Q9ULU4 1186 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms