RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
GGA3-208ENST00000579743 HOOK2Q96ED9 719 aa17.12■□□□□ 0.33
GGA3-208ENST00000579743 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
GGA3-208ENST00000579743 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
GGA3-208ENST00000579743 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
GGA3-208ENST00000579743 SUGT1Q9Y2Z0 365 aa17.12■□□□□ 0.33
GGA3-208ENST00000579743 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
GGA3-208ENST00000579743 LPIN2Q92539 896 aa17.11■□□□□ 0.33
GGA3-208ENST00000579743 MRIQ9BWK5 157 aa17.11■□□□□ 0.33
GGA3-208ENST00000579743 GNL3LQ9NVN8 582 aaKnown RBP17.11■□□□□ 0.33
GGA3-208ENST00000579743 IQSEC3Q9UPP2 1182 aaPredicted RBP17.11■□□□□ 0.33
GGA3-208ENST00000579743 GPR25O00155 361 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 RGS19P49795 217 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 BCAMP50895 628 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
GGA3-208ENST00000579743 WDR66Q8TBY9 1149 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 CEP126Q9P2H0 1117 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
GGA3-208ENST00000579743 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
GGA3-208ENST00000579743 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 FKTNO75072 461 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 VGLL2Q8N8G2 317 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 KLHDC4Q8TBB5 520 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 ZNF296Q8WUU4 475 aaPredicted RBP17.09■□□□□ 0.33
GGA3-208ENST00000579743 WNK4Q96J92 1243 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 CFHR5Q9BXR6 569 aa17.09■□□□□ 0.33
GGA3-208ENST00000579743 IPO8O15397 1037 aaKnown RBP17.08■□□□□ 0.32
GGA3-208ENST00000579743 USP2O75604 605 aaPredicted RBP17.08■□□□□ 0.32
GGA3-208ENST00000579743 WDHD1O75717 1129 aaPredicted RBP17.08■□□□□ 0.32
GGA3-208ENST00000579743 CIAO1O76071 339 aa17.08■□□□□ 0.32
GGA3-208ENST00000579743 CSADQ9Y600 493 aa17.08■□□□□ 0.32
GGA3-208ENST00000579743 FGFR2P21802 821 aa17.07■□□□□ 0.32
GGA3-208ENST00000579743 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
GGA3-208ENST00000579743 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
GGA3-208ENST00000579743 CLMNQ96JQ2 1002 aa17.07■□□□□ 0.32
GGA3-208ENST00000579743 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
GGA3-208ENST00000579743 GNAI3P08754 354 aa17.06■□□□□ 0.32
GGA3-208ENST00000579743 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
GGA3-208ENST00000579743 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
GGA3-208ENST00000579743 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
GGA3-208ENST00000579743 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
GGA3-208ENST00000579743 SIL1Q9H173 461 aa17.06■□□□□ 0.32
GGA3-208ENST00000579743 ARAP2Q8WZ64 1704 aa17.05■□□□□ 0.32
GGA3-208ENST00000579743 RFX5P48382 616 aaPredicted RBP17.05■□□□□ 0.32
GGA3-208ENST00000579743 MAP3K9P80192 1104 aa17.05■□□□□ 0.32
GGA3-208ENST00000579743 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
GGA3-208ENST00000579743 DCAF15Q66K64 600 aa17.05■□□□□ 0.32
GGA3-208ENST00000579743 SEMA3EO15041 775 aa17.04■□□□□ 0.32
GGA3-208ENST00000579743 RARSP54136 660 aaKnown RBP17.04■□□□□ 0.32
GGA3-208ENST00000579743 ARHGEF6Q15052 776 aa17.04■□□□□ 0.32
GGA3-208ENST00000579743 FAM83AQ86UY5 434 aa17.04■□□□□ 0.32
GGA3-208ENST00000579743 TMEM39BQ9GZU3 492 aa17.04■□□□□ 0.32
GGA3-208ENST00000579743 LRRFIP2Q9Y608 721 aaKnown RBP17.04■□□□□ 0.32
GGA3-208ENST00000579743 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 GTF2A2P52657 109 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 FBXO46Q6PJ61 603 aaPredicted RBP17.03■□□□□ 0.32
GGA3-208ENST00000579743 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
GGA3-208ENST00000579743 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 ELP3Q9H9T3 547 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 AKAP2Q9Y2D5 859 aa17.03■□□□□ 0.32
GGA3-208ENST00000579743 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.32
GGA3-208ENST00000579743 SLF2Q8IX21 1173 aa17.02■□□□□ 0.32
GGA3-208ENST00000579743 ERO1AQ96HE7 468 aa17.02■□□□□ 0.32
GGA3-208ENST00000579743 TEPSINQ96N21 525 aa17.02■□□□□ 0.32
GGA3-208ENST00000579743 AOX1Q06278 1338 aa17.01■□□□□ 0.31
GGA3-208ENST00000579743 GRIK5Q16478 980 aa17.01■□□□□ 0.31
GGA3-208ENST00000579743 INTS3Q68E01 1043 aaKnown RBP17.01■□□□□ 0.31
GGA3-208ENST00000579743 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
GGA3-208ENST00000579743 IGF2BP3O00425 579 aaKnown RBP eCLIP17■□□□□ 0.31
GGA3-208ENST00000579743 VGLL4Q14135 290 aa17■□□□□ 0.31
GGA3-208ENST00000579743 APOBEC3HQ6NTF7 200 aaKnown RBP17■□□□□ 0.31
GGA3-208ENST00000579743 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17■□□□□ 0.31
GGA3-208ENST00000579743 FRAT1Q92837 279 aaPredicted RBP17■□□□□ 0.31
GGA3-208ENST00000579743 MEIS3Q99687 375 aa17■□□□□ 0.31
GGA3-208ENST00000579743 TESPA1A2RU30 521 aaPredicted RBP16.99■□□□□ 0.31
GGA3-208ENST00000579743 SRGAP3O43295 1099 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 CACNB3P54284 484 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 SOX10P56693 466 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 SPTY2D1Q68D10 685 aaPredicted RBP16.99■□□□□ 0.31
GGA3-208ENST00000579743 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.99■□□□□ 0.31
GGA3-208ENST00000579743 ERO1BQ86YB8 467 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 OTUD5Q96G74 571 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 WRNIP1Q96S55 665 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 ZNF341Q9BYN7 854 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
GGA3-208ENST00000579743 SALL1Q9NSC2 1324 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 CCL15-CCL14A0A0B4J2E2 113 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 CETPP11597 493 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 CRHR2Q13324 411 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 MVPQ14764 893 aaKnown RBP16.98■□□□□ 0.31
GGA3-208ENST00000579743 CCL15Q16663 113 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 GORABQ5T7V8 394 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
GGA3-208ENST00000579743 PA2G4Q9UQ80 394 aaKnown RBP16.98■□□□□ 0.31
GGA3-208ENST00000579743 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
GGA3-208ENST00000579743 MYH13Q9UKX3 1938 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms