RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, human

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00271-205	ENST00000579339	FKBP1B	P68106	108 aa		33.21	■■■□□ 2.91
LINC00271-205	ENST00000579339	PRKG1	Q13976	671 aa		33.21	■■■□□ 2.91
LINC00271-205	ENST00000579339	CCDC102B	Q68D86	513 aa		33.21	■■■□□ 2.91
LINC00271-205	ENST00000579339	WDR66	Q8TBY9	1149 aa		33.21	■■■□□ 2.91
LINC00271-205	ENST00000579339	MYH13	Q9UKX3	1938 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	FAM155A	B1AL88	458 aa	Predicted RBP	33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	NF2	P35240	595 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	SPDYE2	Q495Y8	402 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	SSH3	Q8TE77	659 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	XAGE2	Q96GT9	111 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	ZNF70	Q9UC06	446 aa	Predicted RBP	33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	AKAP2	Q9Y2D5	859 aa		33.2	■■■□□ 2.91
LINC00271-205	ENST00000579339	NOG	Q13253	232 aa		33.18	■■■□□ 2.9
LINC00271-205	ENST00000579339	TEKT1	Q969V4	418 aa		33.18	■■■□□ 2.9
LINC00271-205	ENST00000579339	NEUROD6	Q96NK8	337 aa		33.18	■■■□□ 2.9
LINC00271-205	ENST00000579339	FZD1	Q9UP38	647 aa		33.18	■■■□□ 2.9
LINC00271-205	ENST00000579339	MS4A1	P11836	297 aa		33.17	■■■□□ 2.9
LINC00271-205	ENST00000579339	DENND2A	Q9ULE3	1009 aa		33.17	■■■□□ 2.9
LINC00271-205	ENST00000579339	SUGT1	Q9Y2Z0	365 aa		33.17	■■■□□ 2.9
LINC00271-205	ENST00000579339	SLC10A3	P09131	477 aa		33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	PRDX5	P30044	214 aa		33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	CTCF	P49711	727 aa	Predicted RBP	33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	HDLBP	Q00341	1268 aa	Known RBP	33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	OS9	Q13438	667 aa	Predicted RBP	33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	RASA3	Q14644	834 aa		33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	CCDC102A	Q96A19	550 aa		33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	COG6	Q9Y2V7	657 aa		33.16	■■■□□ 2.9
LINC00271-205	ENST00000579339	SEMA3E	O15041	775 aa		33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	MAST3	O60307	1309 aa		33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	SURF6	O75683	361 aa	Known RBP	33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	CEP85	Q6P2H3	762 aa		33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	RASAL3	Q86YV0	1011 aa		33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	PPP2R3B	Q9Y5P8	575 aa		33.15	■■■□□ 2.9
LINC00271-205	ENST00000579339	SSC5D	A1L4H1	1573 aa		33.14	■■■□□ 2.9
LINC00271-205	ENST00000579339	TCP10L2	B9ZVM9	353 aa		33.14	■■■□□ 2.9
LINC00271-205	ENST00000579339	RASGRF1	Q13972	1273 aa		33.14	■■■□□ 2.9
LINC00271-205	ENST00000579339	MVP	Q14764	893 aa	Known RBP	33.14	■■■□□ 2.9
LINC00271-205	ENST00000579339	BEGAIN	Q9BUH8	593 aa		33.14	■■■□□ 2.9
LINC00271-205	ENST00000579339	CACNB3	P54284	484 aa		33.13	■■■□□ 2.89
LINC00271-205	ENST00000579339	NBPF12	Q5TAG4	269 aa	Predicted RBP	33.13	■■■□□ 2.89
LINC00271-205	ENST00000579339	ZDHHC15	Q96MV8	337 aa		33.13	■■■□□ 2.89
LINC00271-205	ENST00000579339	HSPA8	P11142	646 aa	Known RBP	33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	LBX1	P52954	281 aa		33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	KIF23	Q02241	960 aa	Predicted RBP	33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	DIXDC1	Q155Q3	683 aa		33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	ARMC9	Q7Z3E5	817 aa		33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	TSKS	Q9UJT2	592 aa		33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	ANGEL1	Q9UNK9	670 aa	Known RBP	33.12	■■■□□ 2.89
LINC00271-205	ENST00000579339	TNFAIP1	Q13829	316 aa		33.11	■■■□□ 2.89
LINC00271-205	ENST00000579339	GORAB	Q5T7V8	394 aa		33.11	■■■□□ 2.89
LINC00271-205	ENST00000579339	APOBEC3H	Q6NTF7	200 aa	Known RBP	33.11	■■■□□ 2.89
LINC00271-205	ENST00000579339	MRI	Q9BWK5	157 aa		33.11	■■■□□ 2.89
LINC00271-205	ENST00000579339	SALL1	Q9NSC2	1324 aa		33.1	■■■□□ 2.89
LINC00271-205	ENST00000579339	LDHB	P07195	334 aa	Known RBP	33.1	■■■□□ 2.89
LINC00271-205	ENST00000579339	HHIPL2	Q6UWX4	724 aa		33.1	■■■□□ 2.89
LINC00271-205	ENST00000579339	CDAN1	Q8IWY9	1227 aa		33.1	■■■□□ 2.89
LINC00271-205	ENST00000579339	NOP58	Q9Y2X3	529 aa	Known RBP	33.09	■■■□□ 2.89
LINC00271-205	ENST00000579339	SUPT20HL1	Q3ZLR7	823 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	TNNI3K	Q59H18	835 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	C20orf194	Q5TEA3	1177 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	TMEM39B	Q9GZU3	492 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	DDX19B	Q9UMR2	479 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	FPGT-TNNI3K	V9GXZ4	949 aa		33.08	■■■□□ 2.89
LINC00271-205	ENST00000579339	ZBTB22	O15209	634 aa		33.07	■■■□□ 2.88
LINC00271-205	ENST00000579339	ABCF2	Q9UG63	623 aa		33.07	■■■□□ 2.88
LINC00271-205	ENST00000579339	DAGLA	Q9Y4D2	1042 aa		33.07	■■■□□ 2.88
LINC00271-205	ENST00000579339	PI16	Q6UXB8	463 aa		33.06	■■■□□ 2.88
LINC00271-205	ENST00000579339	TNNI2	P48788	182 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	MKRN3	Q13064	507 aa	Known RBP	33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	LDLRAD1	Q5T700	205 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	YTHDC1	Q96MU7	727 aa	Known RBP	33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	TEPSIN	Q96N21	525 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	DBNDD2	Q9BQY9	259 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	GPR108	Q9NPR9	543 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	PRDM10	Q9NQV6	1147 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	TMOD2	Q9NZR1	351 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	HMG20B	Q9P0W2	317 aa		33.05	■■■□□ 2.88
LINC00271-205	ENST00000579339	PDS5A	Q29RF7	1337 aa	Known RBP	33.04	■■■□□ 2.88
LINC00271-205	ENST00000579339	PPP1R12B	O60237	982 aa	Predicted RBP	33.04	■■■□□ 2.88
LINC00271-205	ENST00000579339	ZBTB40	Q9NUA8	1239 aa		33.04	■■■□□ 2.88
LINC00271-205	ENST00000579339	EXOC6B	Q9Y2D4	811 aa		33.04	■■■□□ 2.88
LINC00271-205	ENST00000579339	ZGPAT	Q8N5A5	531 aa	Known RBP	33.03	■■■□□ 2.88
LINC00271-205	ENST00000579339	ARID4A	P29374	1257 aa	Predicted RBP	33.02	■■■□□ 2.88
LINC00271-205	ENST00000579339	MAP3K11	Q16584	847 aa		33.02	■■■□□ 2.88
LINC00271-205	ENST00000579339	TNS4	Q8IZW8	715 aa		33.02	■■■□□ 2.88
LINC00271-205	ENST00000579339	CLMN	Q96JQ2	1002 aa		33.02	■■■□□ 2.88
LINC00271-205	ENST00000579339	CSRNP1	Q96S65	589 aa		33.02	■■■□□ 2.88
LINC00271-205	ENST00000579339	CDC42EP5	Q6NZY7	148 aa		33.01	■■■□□ 2.87
LINC00271-205	ENST00000579339	DZIP1	Q86YF9	867 aa	Known RBP	33.01	■■■□□ 2.87
LINC00271-205	ENST00000579339	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	33.01	■■■□□ 2.87
LINC00271-205	ENST00000579339	SPATA5	Q8NB90	893 aa		33.01	■■■□□ 2.87
LINC00271-205	ENST00000579339	CA12	O43570	354 aa		33	■■■□□ 2.87
LINC00271-205	ENST00000579339	USP2	O75604	605 aa	Predicted RBP	33	■■■□□ 2.87
LINC00271-205	ENST00000579339	MCAM	P43121	646 aa		33	■■■□□ 2.87
LINC00271-205	ENST00000579339	TBC1D9	Q6ZT07	1266 aa		33	■■■□□ 2.87
LINC00271-205	ENST00000579339	PDE3A	Q14432	1141 aa		32.99	■■■□□ 2.87
LINC00271-205	ENST00000579339	TLR7	Q9NYK1	1049 aa	Known RBP	32.99	■■■□□ 2.87
LINC00271-205	ENST00000579339	UQCRFS1P1	P0C7P4	283 aa		32.98	■■■□□ 2.87
LINC00271-205	ENST00000579339	IREB2	P48200	963 aa	Known RBP	32.98	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms