RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 SLC5A1P13866 664 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 BCAMP50895 628 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 HDLBPQ00341 1268 aaKnown RBP17.4■□□□□ 0.38
PSMD11-207ENST00000578397 TNFAIP1Q13829 316 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 MAP3K11Q16584 847 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 INTS3Q68E01 1043 aaKnown RBP17.4■□□□□ 0.38
PSMD11-207ENST00000578397 PIP4P2Q8N4L2 257 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 LPIN2Q92539 896 aa17.4■□□□□ 0.38
PSMD11-207ENST00000578397 ANGEL1Q9UNK9 670 aaKnown RBP17.4■□□□□ 0.38
PSMD11-207ENST00000578397 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
PSMD11-207ENST00000578397 IPO8O15397 1037 aaKnown RBP17.39■□□□□ 0.37
PSMD11-207ENST00000578397 CRKP46108 304 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 CHAF1AQ13111 956 aaPredicted RBP17.39■□□□□ 0.37
PSMD11-207ENST00000578397 PRKG1Q13976 671 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 RASA3Q14644 834 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 ATG9AQ7Z3C6 839 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 DZIP1LQ8IYY4 767 aaKnown RBP17.39■□□□□ 0.37
PSMD11-207ENST00000578397 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 ZNF70Q9UC06 446 aaPredicted RBP17.39■□□□□ 0.37
PSMD11-207ENST00000578397 SUGT1Q9Y2Z0 365 aa17.39■□□□□ 0.37
PSMD11-207ENST00000578397 TM4SF4P48230 202 aa17.38■□□□□ 0.37
PSMD11-207ENST00000578397 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
PSMD11-207ENST00000578397 LRRFIP2Q9Y608 721 aaKnown RBP17.38■□□□□ 0.37
PSMD11-207ENST00000578397 AOX1Q06278 1338 aa17.38■□□□□ 0.37
PSMD11-207ENST00000578397 GNAI3P08754 354 aa17.37■□□□□ 0.37
PSMD11-207ENST00000578397 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
PSMD11-207ENST00000578397 SREBF2Q12772 1141 aa17.37■□□□□ 0.37
PSMD11-207ENST00000578397 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
PSMD11-207ENST00000578397 SPDYE1Q8NFV5 336 aaPredicted RBP17.37■□□□□ 0.37
PSMD11-207ENST00000578397 SLC10A4Q96EP9 437 aa17.37■□□□□ 0.37
PSMD11-207ENST00000578397 MEIS3Q99687 375 aa17.37■□□□□ 0.37
PSMD11-207ENST00000578397 TDRD3Q9H7E2 651 aaKnown RBP17.37■□□□□ 0.37
PSMD11-207ENST00000578397 TNNI2P48788 182 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 GRIK5Q16478 980 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 SPRYD7Q5W111 196 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 WDR66Q8TBY9 1149 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 MCOLN1Q9GZU1 580 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 SIL1Q9H173 461 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 COPRSQ9NQ92 184 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 MAST3O60307 1309 aa17.36■□□□□ 0.37
PSMD11-207ENST00000578397 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
PSMD11-207ENST00000578397 DGKZQ13574 1117 aa17.35■□□□□ 0.37
PSMD11-207ENST00000578397 ATP2B3Q16720 1220 aa17.35■□□□□ 0.37
PSMD11-207ENST00000578397 MIER1Q8N108 512 aa17.35■□□□□ 0.37
PSMD11-207ENST00000578397 SSC5DA1L4H1 1573 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 USP2O75604 605 aaPredicted RBP17.34■□□□□ 0.37
PSMD11-207ENST00000578397 ZBTB48P10074 688 aaPredicted RBP17.34■□□□□ 0.37
PSMD11-207ENST00000578397 INHBEP58166 350 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 DIEXFQ68CQ4 756 aaKnown RBP17.34■□□□□ 0.37
PSMD11-207ENST00000578397 ATF7IPQ6VMQ6 1270 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 ZDHHC15Q96MV8 337 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 GNL3LQ9NVN8 582 aaKnown RBP17.34■□□□□ 0.37
PSMD11-207ENST00000578397 CASP8AP2Q9UKL3 1982 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 FZD1Q9UP38 647 aa17.34■□□□□ 0.37
PSMD11-207ENST00000578397 MANSC4A6NHS7 340 aaPredicted RBP17.33■□□□□ 0.36
PSMD11-207ENST00000578397 TRIM27P14373 513 aa17.33■□□□□ 0.36
PSMD11-207ENST00000578397 MKRN3Q13064 507 aaKnown RBP17.33■□□□□ 0.36
PSMD11-207ENST00000578397 MTX1Q13505 466 aa17.33■□□□□ 0.36
PSMD11-207ENST00000578397 HHIPL2Q6UWX4 724 aa17.33■□□□□ 0.36
PSMD11-207ENST00000578397 ANKRD13AQ8IZ07 590 aa17.33■□□□□ 0.36
PSMD11-207ENST00000578397 TEPSINQ96N21 525 aa17.33■□□□□ 0.36
PSMD11-207ENST00000578397 PA2G4Q9UQ80 394 aaKnown RBP17.33■□□□□ 0.36
PSMD11-207ENST00000578397 AKAP11Q9UKA4 1901 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 TCP10L2B9ZVM9 353 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 SEMA3EO15041 775 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 BCAR3O75815 825 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 HNRNPUQ00839 825 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSMD11-207ENST00000578397 NOM1Q5C9Z4 860 aaKnown RBP17.32■□□□□ 0.36
PSMD11-207ENST00000578397 FKBP1CQ5VVH2 108 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
PSMD11-207ENST00000578397 CLMNQ96JQ2 1002 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 CFHR5Q9BXR6 569 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 TMOD2Q9NZR1 351 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 ECM29Q5VYK3 1845 aa17.32■□□□□ 0.36
PSMD11-207ENST00000578397 CCDC85CA6NKD9 419 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 ALDH1A1P00352 501 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 FXR2P51116 673 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSMD11-207ENST00000578397 APOBEC3HQ6NTF7 200 aaKnown RBP17.31■□□□□ 0.36
PSMD11-207ENST00000578397 FAM83AQ86UY5 434 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 WNK4Q96J92 1243 aa17.31■□□□□ 0.36
PSMD11-207ENST00000578397 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
PSMD11-207ENST00000578397 GNAI2P04899 355 aa17.3■□□□□ 0.36
PSMD11-207ENST00000578397 CTU1Q7Z7A3 348 aaKnown RBP17.3■□□□□ 0.36
PSMD11-207ENST00000578397 TMEM39BQ9GZU3 492 aa17.3■□□□□ 0.36
PSMD11-207ENST00000578397 DENND2AQ9ULE3 1009 aa17.3■□□□□ 0.36
PSMD11-207ENST00000578397 SALL1Q9NSC2 1324 aa17.29■□□□□ 0.36
PSMD11-207ENST00000578397 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
PSMD11-207ENST00000578397 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
PSMD11-207ENST00000578397 AKAP2Q9Y2D5 859 aa17.29■□□□□ 0.36
PSMD11-207ENST00000578397 GPR25O00155 361 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
PSMD11-207ENST00000578397 PHKA1P46020 1223 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 MAP3K9P80192 1104 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 CCDC102BQ68D86 513 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 IFNL1Q8IU54 200 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 CDAN1Q8IWY9 1227 aa17.28■□□□□ 0.36
PSMD11-207ENST00000578397 ZNF296Q8WUU4 475 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms