RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 RFX5P48382 616 aaPredicted RBP18.67■□□□□ 0.58
RN7SL560P-201ENST00000577943 SLC5A1P13866 664 aa18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 FGFR2P21802 821 aa18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 GRIK5Q16478 980 aa18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 CTU1Q7Z7A3 348 aaKnown RBP18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 CLMNQ96JQ2 1002 aa18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 HDAC5Q9UQL6 1122 aa18.66■□□□□ 0.58
RN7SL560P-201ENST00000577943 UNCXA6NJT0 531 aa18.65■□□□□ 0.58
RN7SL560P-201ENST00000577943 TCP10L2B9ZVM9 353 aa18.65■□□□□ 0.58
RN7SL560P-201ENST00000577943 USP2O75604 605 aaPredicted RBP18.65■□□□□ 0.58
RN7SL560P-201ENST00000577943 SIL1Q9H173 461 aa18.65■□□□□ 0.58
RN7SL560P-201ENST00000577943 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
RN7SL560P-201ENST00000577943 MANSC4A6NHS7 340 aaPredicted RBP18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 ZBTB48P10074 688 aaPredicted RBP18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 TNNI2P48788 182 aa18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 HDLBPQ00341 1268 aaKnown RBP18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 ZNF296Q8WUU4 475 aaPredicted RBP18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 LPIN2Q92539 896 aa18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 TEKT1Q969V4 418 aa18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 WNK4Q96J92 1243 aa18.64■□□□□ 0.57
RN7SL560P-201ENST00000577943 INHBEP58166 350 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 ATG9AQ7Z3C6 839 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 ANKRD13AQ8IZ07 590 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 CEP126Q9P2H0 1117 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 LRRFIP2Q9Y608 721 aaKnown RBP18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 MAST3O60307 1309 aa18.63■□□□□ 0.57
RN7SL560P-201ENST00000577943 GPR25O00155 361 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 ALDH1A1P00352 501 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 RGS19P49795 217 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 MLLT1Q03111 559 aaPredicted RBP18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 TMEM39BQ9GZU3 492 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 TMOD2Q9NZR1 351 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 SUGT1Q9Y2Z0 365 aa18.62■□□□□ 0.57
RN7SL560P-201ENST00000577943 CIAO1O76071 339 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 ATP2B3Q16720 1220 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 WDR66Q8TBY9 1149 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 TEPSINQ96N21 525 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 MEIS3Q99687 375 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 MRIQ9BWK5 157 aa18.61■□□□□ 0.57
RN7SL560P-201ENST00000577943 CACNB3P54284 484 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 NOM1Q5C9Z4 860 aaKnown RBP18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 CDAN1Q8IWY9 1227 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 ZDHHC15Q96MV8 337 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 CFHR5Q9BXR6 569 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 PA2G4Q9UQ80 394 aaKnown RBP18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 MYH2Q9UKX2 1941 aa18.6■□□□□ 0.57
RN7SL560P-201ENST00000577943 FKTNO75072 461 aa18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 PKN2Q16513 984 aaKnown RBP18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 HHIPL2Q6UWX4 724 aa18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 R3HDMLQ9H3Y0 253 aa18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 ELP3Q9H9T3 547 aa18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 GNL3LQ9NVN8 582 aaKnown RBP18.59■□□□□ 0.57
RN7SL560P-201ENST00000577943 IGF2BP3O00425 579 aaKnown RBP eCLIP18.58■□□□□ 0.56
RN7SL560P-201ENST00000577943 GJA5P36382 358 aa18.58■□□□□ 0.56
RN7SL560P-201ENST00000577943 IL15P40933 162 aaPredicted RBP18.58■□□□□ 0.56
RN7SL560P-201ENST00000577943 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.56
RN7SL560P-201ENST00000577943 OTUD7BQ6GQQ9 843 aa18.58■□□□□ 0.56
RN7SL560P-201ENST00000577943 IPO8O15397 1037 aaKnown RBP18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 GNAI3P08754 354 aa18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 MAP3K9P80192 1104 aa18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 APOBEC3HQ6NTF7 200 aaKnown RBP18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 OPTNQ96CV9 577 aa18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 COPRSQ9NQ92 184 aa18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 CSADQ9Y600 493 aa18.57■□□□□ 0.56
RN7SL560P-201ENST00000577943 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.56■□□□□ 0.56
RN7SL560P-201ENST00000577943 FAM83AQ86UY5 434 aa18.56■□□□□ 0.56
RN7SL560P-201ENST00000577943 FRAT1Q92837 279 aaPredicted RBP18.56■□□□□ 0.56
RN7SL560P-201ENST00000577943 HPS5Q9UPZ3 1129 aa18.56■□□□□ 0.56
RN7SL560P-201ENST00000577943 LDHBP07195 334 aaKnown RBP18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 SOX10P56693 466 aa18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 VGLL4Q14135 290 aa18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 FKBP1CQ5VVH2 108 aa18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 HOOK2Q96ED9 719 aa18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 DENND2AQ9ULE3 1009 aa18.55■□□□□ 0.56
RN7SL560P-201ENST00000577943 SRGAP3O43295 1099 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 BCAR3O75815 825 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 TRIM27P14373 513 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 PRDX5P30044 214 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 PHKA1P46020 1223 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 CNKSR2Q8WXI2 1034 aa18.54■□□□□ 0.56
RN7SL560P-201ENST00000577943 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 SEMA3EO15041 775 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 ADORA1P30542 326 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 DIXDC1Q155Q3 683 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 FBXO46Q6PJ61 603 aaPredicted RBP18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 PTPN18Q99952 460 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 DAGLAQ9Y4D2 1042 aa18.53■□□□□ 0.56
RN7SL560P-201ENST00000577943 TIMM10P62072 90 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 CRHR2Q13324 411 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 DCAF15Q66K64 600 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 CLUAP1Q96AJ1 413 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 OTUD5Q96G74 571 aa18.52■□□□□ 0.56
RN7SL560P-201ENST00000577943 MS4A4AQ96JQ5 239 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms