RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 TCP10L2B9ZVM9 353 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 SEMA3EO15041 775 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 TNFAIP1Q13829 316 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 RASGRF1Q13972 1273 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 GRIK5Q16478 980 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 TNNI3KQ59H18 835 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 CCDC158Q5M9N0 1113 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 DEFB129Q9H1M3 183 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 FPGT-TNNI3KV9GXZ4 949 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 PSME4Q14997 1843 aa11.36□□□□□ -0.59
CDKN2A-211ENST00000577854 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 HSPA1AP0DMV8 641 aaKnown RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 HSPA1BP0DMV9 641 aaKnown RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 PRDX5P30044 214 aa11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 ZNF157P51786 506 aaPredicted RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 ERC1Q8IUD2 1116 aa11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 BEGAINQ9BUH8 593 aa11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 CCDC8Q9H0W5 538 aaPredicted RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 ZBTB40Q9NUA8 1239 aa11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
CDKN2A-211ENST00000577854 COL1A1P02452 1464 aaPredicted RBP11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 AOC2O75106 756 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 UQCRFS1P1P0C7P4 283 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 TNNI2P48788 182 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 CACNB3P54284 484 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 ARMC9Q7Z3E5 817 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 AACSQ86V21 672 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 JMYQ8N9B5 988 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 SUGT1Q9Y2Z0 365 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 AOX1Q06278 1338 aa11.34□□□□□ -0.59
CDKN2A-211ENST00000577854 UBE2Q2LH0YL09 131 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 RASA3Q14644 834 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 RGMBQ6NW40 437 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 PI16Q6UXB8 463 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 SLF2Q8IX21 1173 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 SPATA5Q8NB90 893 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 SNRKQ9NRH2 765 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 RAI14Q9P0K7 980 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 LRP2BPQ9P2M1 347 aa11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 ANGEL1Q9UNK9 670 aaKnown RBP11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 NOP58Q9Y2X3 529 aaKnown RBP11.33□□□□□ -0.6
CDKN2A-211ENST00000577854 PPP1R12BO60237 982 aaPredicted RBP11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 FKBP1BP68106 108 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 HDLBPQ00341 1268 aaKnown RBP11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 SUPT20HL1Q3ZLR7 823 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 TBC1D9Q6ZT07 1266 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 CLASRPQ8N2M8 674 aaKnown RBP11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 ZDHHC15Q96MV8 337 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 GPR108Q9NPR9 543 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 TLR7Q9NYK1 1049 aaKnown RBP11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 HMG20BQ9P0W2 317 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 FZD1Q9UP38 647 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 PPP2R3BQ9Y5P8 575 aa11.32□□□□□ -0.6
CDKN2A-211ENST00000577854 PCNTO95613 3336 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 IFIT2P09913 472 aaKnown RBP11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 MAP2K1Q02750 393 aaPredicted RBP11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 RHPN1Q8TCX5 695 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 CCDC102AQ96A19 550 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 NOL10Q9BSC4 688 aaKnown RBP11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 DAGLAQ9Y4D2 1042 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 SALL1Q9NSC2 1324 aa11.31□□□□□ -0.6
CDKN2A-211ENST00000577854 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 TRPM7Q96QT4 1865 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 ARID4AP29374 1257 aaPredicted RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 MCAMP43121 646 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 GSTO1P78417 241 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 TCP10Q12799 353 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 NOGQ13253 232 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 NBPF12Q5TAG4 269 aaPredicted RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 APOBEC3HQ6NTF7 200 aaKnown RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 EAF2Q96CJ1 260 aaPredicted RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 DBNLQ9UJU6 430 aaKnown RBP11.3□□□□□ -0.6
CDKN2A-211ENST00000577854 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
CDKN2A-211ENST00000577854 BTDP43251 543 aa11.29□□□□□ -0.6
CDKN2A-211ENST00000577854 MECOMQ03112 1051 aa11.29□□□□□ -0.6
CDKN2A-211ENST00000577854 CDC42EP5Q6NZY7 148 aa11.29□□□□□ -0.6
CDKN2A-211ENST00000577854 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms