RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 ZNF384Q8TF68 577 aa15.44■□□□□ 0.06
MKS1-206ENST00000577824 NSUN4Q96CB9 384 aaKnown RBP15.44■□□□□ 0.06
MKS1-206ENST00000577824 MYH7P12883 1935 aa15.44■□□□□ 0.06
MKS1-206ENST00000577824 GAKO14976 1311 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 ECM29Q5VYK3 1845 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 IQCA1LA6NCM1 817 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 GOLIM4O00461 696 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 GSPT1P15170 499 aaKnown RBP15.43■□□□□ 0.06
MKS1-206ENST00000577824 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 KIAA0825Q8IV33 1275 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 MICALL2Q8IY33 904 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 KBTBD3Q8NAB2 608 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 EDC3Q96F86 508 aaKnown RBP15.43■□□□□ 0.06
MKS1-206ENST00000577824 FAM163AQ96GL9 167 aaPredicted RBP15.43■□□□□ 0.06
MKS1-206ENST00000577824 ZBED3Q96IU2 234 aaPredicted RBP15.43■□□□□ 0.06
MKS1-206ENST00000577824 ABCF2Q9UG63 623 aa15.43■□□□□ 0.06
MKS1-206ENST00000577824 LMOD1P29536 600 aaPredicted RBP15.42■□□□□ 0.06
MKS1-206ENST00000577824 MECOMQ03112 1051 aa15.42■□□□□ 0.06
MKS1-206ENST00000577824 HHIPL2Q6UWX4 724 aa15.42■□□□□ 0.06
MKS1-206ENST00000577824 OGFOD1Q8N543 542 aa15.42■□□□□ 0.06
MKS1-206ENST00000577824 EVI5LQ96CN4 794 aa15.42■□□□□ 0.06
MKS1-206ENST00000577824 ADARB2Q9NS39 739 aaKnown RBP15.42■□□□□ 0.06
MKS1-206ENST00000577824 CNOT7Q9UIV1 285 aaKnown RBP15.42■□□□□ 0.06
MKS1-206ENST00000577824 HDAC9Q9UKV0 1011 aa15.42■□□□□ 0.06
MKS1-206ENST00000577824 TTF2Q9UNY4 1162 aaKnown RBP15.42■□□□□ 0.06
MKS1-206ENST00000577824 SHTN1A0MZ66 631 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 EPS15P42566 896 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 MAP3K12Q12852 859 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 SKAP1Q86WV1 359 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 DZIP1Q86YF9 867 aaKnown RBP15.41■□□□□ 0.06
MKS1-206ENST00000577824 ZDHHC15Q96MV8 337 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 MYOZ2Q9NPC6 264 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 LRP2BPQ9P2M1 347 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 MROH7-TTC4A0A0A0MT08 1334 aa15.41■□□□□ 0.06
MKS1-206ENST00000577824 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
MKS1-206ENST00000577824 CRKP46108 304 aa15.4■□□□□ 0.06
MKS1-206ENST00000577824 BMP2KLQ5H9B9 411 aa15.4■□□□□ 0.06
MKS1-206ENST00000577824 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
MKS1-206ENST00000577824 TEKT1Q969V4 418 aa15.4■□□□□ 0.06
MKS1-206ENST00000577824 TAF1DQ9H5J8 278 aaPredicted RBP15.4■□□□□ 0.06
MKS1-206ENST00000577824 AK9Q5TCS8 1911 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 SPDYE2BA6NHP3 402 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 H7C1D1 291 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 IDH1O75874 414 aaKnown RBP15.39■□□□□ 0.05
MKS1-206ENST00000577824 SPDYE6P0CI01 402 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 VEGFAP15692 232 aaPredicted RBP15.39■□□□□ 0.05
MKS1-206ENST00000577824 PDE6AP16499 860 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 YY1P25490 414 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 ADD2P35612 726 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 GSTO1P78417 241 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 UBE3CQ15386 1083 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 DIXDC1Q155Q3 683 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 KIF4BQ2VIQ3 1234 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 USP50Q70EL3 339 aaPredicted RBP15.39■□□□□ 0.05
MKS1-206ENST00000577824 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.39■□□□□ 0.05
MKS1-206ENST00000577824 RAI14Q9P0K7 980 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 DAGLAQ9Y4D2 1042 aa15.39■□□□□ 0.05
MKS1-206ENST00000577824 F8W031 263 aaPredicted RBP15.38■□□□□ 0.05
MKS1-206ENST00000577824 EGFRP00533 1210 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 ZFYP08048 801 aaPredicted RBP15.38■□□□□ 0.05
MKS1-206ENST00000577824 EPHX2P34913 555 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
MKS1-206ENST00000577824 CFAP100Q494V2 611 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 NAA16Q6N069 864 aaPredicted RBP15.38■□□□□ 0.05
MKS1-206ENST00000577824 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 TRPM4Q8TD43 1214 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 NMRK2Q9NPI5 230 aa15.38■□□□□ 0.05
MKS1-206ENST00000577824 GPR75-ASB3A0A0A6YYF3 556 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 WNT10BO00744 389 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 MAP4K4O95819 1239 aaPredicted RBP15.37■□□□□ 0.05
MKS1-206ENST00000577824 SLC9C2Q5TAH2 1124 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
MKS1-206ENST00000577824 SAMD7Q7Z3H4 446 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 ADGRA1Q86SQ6 560 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
MKS1-206ENST00000577824 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 MAGEB6Q8N7X4 407 aa15.37■□□□□ 0.05
MKS1-206ENST00000577824 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
MKS1-206ENST00000577824 FOCADQ5VW36 1801 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 NPM3O75607 178 aaKnown RBP15.36■□□□□ 0.05
MKS1-206ENST00000577824 LDHCP07864 332 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 SDSP20132 328 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 RGS3P49796 1198 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 HIRAP54198 1017 aaPredicted RBP15.36■□□□□ 0.05
MKS1-206ENST00000577824 DLGAP5Q15398 846 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 TBC1D10BQ4KMP7 808 aaPredicted RBP15.36■□□□□ 0.05
MKS1-206ENST00000577824 ZC3H15Q8WU90 426 aaKnown RBP15.36■□□□□ 0.05
MKS1-206ENST00000577824 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 RRAGCQ9HB90 399 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 GPBP1L1Q9HC44 474 aaPredicted RBP15.36■□□□□ 0.05
MKS1-206ENST00000577824 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 PCDHAC2Q9Y5I4 1007 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 PITPNM2Q9BZ72 1349 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 ZNF532Q9HCE3 1301 aa15.36■□□□□ 0.05
MKS1-206ENST00000577824 TRIM6-TRIM34B2RNG4 842 aa15.35■□□□□ 0.05
MKS1-206ENST00000577824 RNF113AO15541 343 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms