RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 PTPRCP08575 1304 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 SP3Q02447 781 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 CRHR2Q13324 411 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 TEKT1Q969V4 418 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 OPTNQ96CV9 577 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 R3HDMLQ9H3Y0 253 aa17.85■□□□□ 0.45
SMARCD2-205ENST00000577686 UTYO14607 1347 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 TCP10L2B9ZVM9 353 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 MAP3K9P80192 1104 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 CHAF1AQ13111 956 aaPredicted RBP17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 ZFYVE28Q9HCC9 887 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 SUGT1Q9Y2Z0 365 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 PDE4DIPQ5VU43 2346 aa17.84■□□□□ 0.45
SMARCD2-205ENST00000577686 IFIT1P09914 478 aaKnown RBP17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 BICC1Q9H694 974 aaKnown RBP17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 ARAP2Q8WZ64 1704 aa17.83■□□□□ 0.44
SMARCD2-205ENST00000577686 LAMB1P07942 1786 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 KIF16BQ96L93 1317 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 PDE8BO95263 885 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 TAF1CQ15572 869 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 CCL15Q16663 113 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 RABL6Q3YEC7 729 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 DCAF15Q66K64 600 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 FBXO33Q7Z6M2 555 aa17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 PUS3Q9BZE2 481 aaKnown RBP17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 SPINK5Q9NQ38 1064 aaPredicted RBP17.82■□□□□ 0.44
SMARCD2-205ENST00000577686 ZNF316A6NFI3 1004 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 NBPF7P0C2Y1 421 aaPredicted RBP17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 GJA5P36382 358 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 KIF22Q14807 665 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 FKBP1CQ5VVH2 108 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 NBPF11Q86T75 865 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 FAM83AQ86UY5 434 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 TMEM106CQ9BVX2 250 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 MRIQ9BWK5 157 aa17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 ZCCHC17Q9NP64 241 aaKnown RBP17.81■□□□□ 0.44
SMARCD2-205ENST00000577686 AOX1Q06278 1338 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 CETPP11597 493 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 VGLL4Q14135 290 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 ARMC5Q96C12 935 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 OTUD5Q96G74 571 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 TEPSINQ96N21 525 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 TMEM39BQ9GZU3 492 aa17.8■□□□□ 0.44
SMARCD2-205ENST00000577686 SPDYE5A6NIY4 337 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 SLC5A1P13866 664 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 ERO1BQ86YB8 467 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 WDR66Q8TBY9 1149 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
SMARCD2-205ENST00000577686 E9PSI1 815 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 SNAPC2Q13487 334 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 BRI3BPQ8WY22 251 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 KAZALD1Q96I82 304 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 WRNIP1Q96S55 665 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 PTPN18Q99952 460 aa17.78■□□□□ 0.44
SMARCD2-205ENST00000577686 SLC9C1Q4G0N8 1177 aa17.77■□□□□ 0.44
SMARCD2-205ENST00000577686 LRRC24Q50LG9 513 aa17.77■□□□□ 0.44
SMARCD2-205ENST00000577686 MRPL50Q8N5N7 158 aaKnown RBP17.77■□□□□ 0.44
SMARCD2-205ENST00000577686 GNL3LQ9NVN8 582 aaKnown RBP17.77■□□□□ 0.44
SMARCD2-205ENST00000577686 TNRC18O15417 2968 aaPredicted RBP17.77■□□□□ 0.44
SMARCD2-205ENST00000577686 GNRH1P01148 92 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 PRMT2P55345 433 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 HHIPL2Q6UWX4 724 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 ANKRD44Q8N8A2 993 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 LPIN2Q92539 896 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 ZNF341Q9BYN7 854 aa17.76■□□□□ 0.43
SMARCD2-205ENST00000577686 OTOFQ9HC10 1997 aa17.75■□□□□ 0.43
SMARCD2-205ENST00000577686 PPIL2Q13356 520 aa17.75■□□□□ 0.43
SMARCD2-205ENST00000577686 VGLL2Q8N8G2 317 aa17.75■□□□□ 0.43
SMARCD2-205ENST00000577686 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
SMARCD2-205ENST00000577686 EYA2O00167 538 aa17.74■□□□□ 0.43
SMARCD2-205ENST00000577686 BCAMP50895 628 aa17.74■□□□□ 0.43
SMARCD2-205ENST00000577686 CACNB3P54284 484 aa17.74■□□□□ 0.43
SMARCD2-205ENST00000577686 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 POTEFA5A3E0 1075 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 TLR2O60603 784 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 PPATQ06203 517 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 ALDH1L2Q3SY69 923 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 CDAN1Q8IWY9 1227 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 FAM43AQ8N2R8 423 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 SNCAIPQ9Y6H5 919 aa17.73■□□□□ 0.43
SMARCD2-205ENST00000577686 FGFR2P21802 821 aa17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 GRIK5Q16478 980 aa17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 APOBEC3HQ6NTF7 200 aaKnown RBP17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 ZGPATQ8N5A5 531 aaKnown RBP17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 FAM151AQ8WW52 585 aa17.72■□□□□ 0.43
SMARCD2-205ENST00000577686 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms