RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 DPP8Q6V1X1 898 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 AACSQ86V21 672 aa13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 C2orf69Q8N8R5 385 aa13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 DUOX1Q9NRD9 1551 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SNAP23O00161 211 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ATP5JP18859 108 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PDE1AP54750 535 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 USP48Q86UV5 1035 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SLC51AQ86UW1 340 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TICAM2Q86XR7 235 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 EYA3Q99504 573 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ECHDC1Q9NTX5 307 aa13.62□□□□□ -0.23
CDK5RAP3-204ENST00000577664 GPR25O00155 361 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 IGSF3O75054 1194 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 MX1P20591 662 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ARID4AP29374 1257 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 GMPSP49915 693 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CXCL9Q07325 125 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CAVIN4Q5BKX8 364 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CCDC158Q5M9N0 1113 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CCDC102BQ68D86 513 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 NIM1KQ8IY84 436 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PI4K2BQ8TCG2 481 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TRPM4Q8TD43 1214 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 NEUROD6Q96NK8 337 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 CFHR5Q9BXR6 569 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ARAP2Q8WZ64 1704 aa13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PDS5AQ29RF7 1337 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SEMA3EO15041 775 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 UFL1O94874 794 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 IL1R1P14778 569 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ADORA1P30542 326 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 KCNJ4P48050 445 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 KIAA2012Q0VF49 1180 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 WASHC4Q2M389 1173 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TXNRD3Q86VQ6 643 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TDRD7Q8NHU6 1098 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ZC3H12CQ9C0D7 883 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TLR7Q9NYK1 1049 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-204ENST00000577664 C6orf229H3BNL8 230 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ERC2O15083 957 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 GLRX3O76003 335 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 BCAMP50895 628 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PODNQ7Z5L7 613 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
CDK5RAP3-204ENST00000577664 TBC1D8O95759 1140 aa13.58□□□□□ -0.24
CDK5RAP3-204ENST00000577664 HAUS7Q99871 368 aa13.58□□□□□ -0.24
CDK5RAP3-204ENST00000577664 CD209Q9NNX6 404 aa13.58□□□□□ -0.24
CDK5RAP3-204ENST00000577664 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
CDK5RAP3-204ENST00000577664 KLRK1P26718 216 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 PHKA1P46020 1223 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 GYG1P46976 350 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 KRT26Q7Z3Y9 468 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 ZNF804AQ7Z570 1209 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 GNL3LQ9NVN8 582 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 UNC80Q8N2C7 3258 aa13.57□□□□□ -0.24
CDK5RAP3-204ENST00000577664 H0YGN5 161 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 PPIP5K2O43314 1243 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 FKTNO75072 461 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 BMP2KLQ5H9B9 411 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 GORABQ5T7V8 394 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 PRO3102Q9H379 93 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 DENND2AQ9ULE3 1009 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 LAMA3Q16787 3333 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 FAM205AQ6ZU69 1335 aa13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 POLR2AP24928 1970 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP3-204ENST00000577664 EN2P19622 333 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 MCAMP43121 646 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 TM4SF4P48230 202 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 FKBP1AP62942 108 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 TTC22Q5TAA0 569 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 HMG20BQ9P0W2 317 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SALL1Q9NSC2 1324 aa13.55□□□□□ -0.24
CDK5RAP3-204ENST00000577664 RASGRF1Q13972 1273 aa13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SCARF1Q14162 830 aa13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 AOC3Q16853 763 aa13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SPATA5Q8NB90 893 aa13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 COL25A1Q9BXS0 654 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP3-204ENST00000577664 H7C1D1 291 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 FKBP1BP68106 108 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 TNIP1Q15025 636 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 SKAP1Q86WV1 359 aa13.53□□□□□ -0.24
CDK5RAP3-204ENST00000577664 WDR66Q8TBY9 1149 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms