RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.9□□□□□ -0.82
CDH8-203ENST00000577390 INSRP06213 1382 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 ALDH3A1P30838 453 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 TRIM4Q9C037 500 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 BZW2Q9Y6E2 419 aaKnown RBP9.9□□□□□ -0.82
CDH8-203ENST00000577390 SEC24BO95487 1268 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 MYCP01106 439 aaPredicted RBP9.9□□□□□ -0.82
CDH8-203ENST00000577390 MMP14P50281 582 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 INF2Q27J81 1249 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 HYPKQ9NX55 129 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 RASAL2Q9UJF2 1139 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 SMIM24O75264 130 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 SLFN14P0C7P3 912 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 PNMA6AP0CW24 399 aaPredicted RBP9.9□□□□□ -0.82
CDH8-203ENST00000577390 TMED8Q6PL24 325 aaPredicted RBP9.9□□□□□ -0.82
CDH8-203ENST00000577390 KRT23Q9C075 422 aa9.9□□□□□ -0.82
CDH8-203ENST00000577390 CALM1P0DP23 149 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 CALM2P0DP24 149 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 CALM3P0DP25 149 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 AFAP1Q8N556 730 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 TACC1O75410 805 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.83
CDH8-203ENST00000577390 ANO6Q4KMQ2 910 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 UBE3BQ7Z3V4 1068 aa9.9□□□□□ -0.83
CDH8-203ENST00000577390 PYGLP06737 847 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 FBXO38Q6PIJ6 1188 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 TBC1D22AQ8WUA7 517 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 BACH1O14867 736 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 MAP3K7O43318 606 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 HARSP12081 509 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 CAMK4Q16566 473 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 IFI16Q16666 785 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CATIPQ7Z7H3 387 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 AACSQ86V21 672 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CARD10Q9BWT7 1032 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 NSRP1Q9H0G5 558 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 NR1I2O75469 434 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CD2APQ9Y5K6 639 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 SRLQ86TD4 932 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 DDX19AQ9NUU7 478 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 ZNF165P49910 485 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 PCF11O94913 1555 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 EHBP1L1Q8N3D4 1523 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CAMSAP2Q08AD1 1489 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 PTCD1O75127 700 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 XPAP23025 273 aaPredicted RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 FAM47CQ5HY64 1035 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 ZC4H2Q9NQZ6 224 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 LMBRD1Q9NUN5 540 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 STIM2Q9P246 746 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CCDC12Q8WUD4 166 aaPredicted RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 ARHGEF1Q92888 912 aaKnown RBP9.89□□□□□ -0.83
CDH8-203ENST00000577390 TMOD3Q9NYL9 352 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 LIMCH1Q9UPQ0 1083 aa9.89□□□□□ -0.83
CDH8-203ENST00000577390 CTIFO43310 598 aaKnown RBP9.88□□□□□ -0.83
CDH8-203ENST00000577390 IFIT1P09914 478 aaKnown RBP9.88□□□□□ -0.83
CDH8-203ENST00000577390 SRGAP1Q7Z6B7 1085 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 SNCBQ16143 134 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 GPR161Q8N6U8 529 aaKnown RBP9.88□□□□□ -0.83
CDH8-203ENST00000577390 CXorf38Q8TB03 319 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 STK10O94804 968 aaKnown RBP9.88□□□□□ -0.83
CDH8-203ENST00000577390 LIG3P49916 1009 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 SLFN5Q08AF3 891 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 SPAG5Q96R06 1193 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 CARMIL2Q6F5E8 1435 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 SMIM23A6NLE4 172 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 ZNF467Q7Z7K2 595 aaPredicted RBP9.88□□□□□ -0.83
CDH8-203ENST00000577390 KRT9P35527 623 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 GPR162Q16538 588 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 TEX11Q8IYF3 940 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 ARMC2Q8NEN0 867 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 BAG3O95817 575 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 CEP128Q6ZU80 1094 aa9.88□□□□□ -0.83
CDH8-203ENST00000577390 NOP56O00567 594 aaKnown RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 ITIH3Q06033 890 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 ZNF365Q70YC5 407 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 CCDC25Q86WR0 208 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 RPS6KA2Q15349 733 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 POMGNT1Q8WZA1 660 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.87□□□□□ -0.83
CDH8-203ENST00000577390 TBC1D9Q6ZT07 1266 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 RNF169Q8NCN4 708 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 TRIM66O15016 1216 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 YEATS4O95619 227 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 ATICP31939 592 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 ERMNQ8TAM6 284 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 MRPL46Q9H2W6 279 aaKnown RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 SLC12A7Q9Y666 1083 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 CAPN7Q9Y6W3 813 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 BIRC3Q13489 604 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 MAP7Q14244 749 aa9.87□□□□□ -0.83
CDH8-203ENST00000577390 ZNF530Q6P9A1 599 aaPredicted RBP9.87□□□□□ -0.83
CDH8-203ENST00000577390 HVCN1Q96D96 273 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms