RNA–Protein interactions for RNA: ENST00000576601.1

CIITA-211, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 4

Gene CIITA, Length 626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-211ENST00000576601 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
CIITA-211ENST00000576601 JAG2Q9Y219 1238 aa17.63■□□□□ 0.41
CIITA-211ENST00000576601 A0A1W2PPC1 479 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 GJA8P48165 433 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 CCDC30Q5VVM6 783 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 G2E3Q7L622 706 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 UBE3BQ7Z3V4 1068 aa17.62■□□□□ 0.41
CIITA-211ENST00000576601 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 SPDYE5A6NIY4 337 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 BTBD19C9JJ37 291 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 GNRH1P01148 92 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 CASP7P55210 303 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 WWC1Q8IX03 1113 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 TRIM47Q96LD4 638 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 PLA2G12BQ9BX93 195 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 ZCCHC17Q9NP64 241 aaKnown RBP17.61■□□□□ 0.41
CIITA-211ENST00000576601 ZNF70Q9UC06 446 aaPredicted RBP17.61■□□□□ 0.41
CIITA-211ENST00000576601 SNCAIPQ9Y6H5 919 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 ADGRA2Q96PE1 1338 aa17.61■□□□□ 0.41
CIITA-211ENST00000576601 H7C1W4 665 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 TAF5LO75529 589 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 DDX58O95786 925 aaKnown RBP17.6■□□□□ 0.41
CIITA-211ENST00000576601 GJB1P08034 283 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 PRMT2P55345 433 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 C17orf99Q6UX52 265 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 KSR2Q6VAB6 950 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 SRRDQ9UH36 339 aa17.6■□□□□ 0.41
CIITA-211ENST00000576601 AK9Q5TCS8 1911 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 MYH13Q9UKX3 1938 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 ECM2O94769 699 aaPredicted RBP17.59■□□□□ 0.41
CIITA-211ENST00000576601 CSF1RP07333 972 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 CCL5P13501 91 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 KCNJ4P48050 445 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 MAP3K9P80192 1104 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 TNFAIP1Q13829 316 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 MPHOSPH8Q99549 860 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 HTATIP2Q9BUP3 242 aa17.59■□□□□ 0.41
CIITA-211ENST00000576601 TDRD3Q9H7E2 651 aaKnown RBP17.59■□□□□ 0.41
CIITA-211ENST00000576601 FANCIQ9NVI1 1328 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 IRF6O14896 467 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 OSBPP22059 807 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 RBM5P52756 815 aaKnown RBP eCLIP17.58■□□□□ 0.4
CIITA-211ENST00000576601 KIF22Q14807 665 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 TWISTNBQ3B726 338 aaPredicted RBP17.58■□□□□ 0.4
CIITA-211ENST00000576601 HELBQ8NG08 1087 aaPredicted RBP17.58■□□□□ 0.4
CIITA-211ENST00000576601 NKX2-3Q8TAU0 364 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 RIPOR2Q9Y4F9 1068 aa17.58■□□□□ 0.4
CIITA-211ENST00000576601 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 GRK4P32298 578 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 MRS2Q9HD23 443 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 SERPINA10Q9UK55 444 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 NR2E3Q9Y5X4 410 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 CSADQ9Y600 493 aa17.57■□□□□ 0.4
CIITA-211ENST00000576601 FARP2O94887 1054 aaPredicted RBP17.56■□□□□ 0.4
CIITA-211ENST00000576601 CETPP11597 493 aa17.56■□□□□ 0.4
CIITA-211ENST00000576601 PSMC4P43686 418 aa17.56■□□□□ 0.4
CIITA-211ENST00000576601 STK31Q9BXU1 1019 aa17.56■□□□□ 0.4
CIITA-211ENST00000576601 CPA4Q9UI42 421 aa17.56■□□□□ 0.4
CIITA-211ENST00000576601 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
CIITA-211ENST00000576601 TCP10L2B9ZVM9 353 aa17.55■□□□□ 0.4
CIITA-211ENST00000576601 ERO1BQ86YB8 467 aa17.55■□□□□ 0.4
CIITA-211ENST00000576601 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
CIITA-211ENST00000576601 U2AF1L4Q8WU68 220 aaKnown RBP17.55■□□□□ 0.4
CIITA-211ENST00000576601 PHIPQ8WWQ0 1821 aa17.55■□□□□ 0.4
CIITA-211ENST00000576601 DDX60LQ5H9U9 1706 aaKnown RBP17.55■□□□□ 0.4
CIITA-211ENST00000576601 IL16Q14005 1332 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 MYPNQ86TC9 1320 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 PPIL2Q13356 520 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 SNAPC2Q13487 334 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 GCKRQ14397 625 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 GRIK5Q16478 980 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 ZKSCAN4Q969J2 545 aaPredicted RBP17.54■□□□□ 0.4
CIITA-211ENST00000576601 RNF208Q9H0X6 261 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 STAP2Q9UGK3 403 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 TTF2Q9UNY4 1162 aaKnown RBP17.54■□□□□ 0.4
CIITA-211ENST00000576601 DOCK2Q92608 1830 aa17.54■□□□□ 0.4
CIITA-211ENST00000576601 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 FLIIQ13045 1269 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 MOGSQ13724 837 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 RAET1EQ8TD07 263 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 UNC93B1Q9H1C4 597 aa17.53■□□□□ 0.4
CIITA-211ENST00000576601 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.4
CIITA-211ENST00000576601 PRKCZQ05513 592 aa17.52■□□□□ 0.4
CIITA-211ENST00000576601 Q7L0L9 218 aa17.52■□□□□ 0.4
CIITA-211ENST00000576601 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
CIITA-211ENST00000576601 CRKP46108 304 aa17.51■□□□□ 0.39
CIITA-211ENST00000576601 CACNB3P54284 484 aa17.51■□□□□ 0.39
CIITA-211ENST00000576601 GPR153Q6NV75 609 aa17.51■□□□□ 0.39
CIITA-211ENST00000576601 TDRD7Q8NHU6 1098 aaKnown RBP17.51■□□□□ 0.39
CIITA-211ENST00000576601 GDF15Q99988 308 aa17.51■□□□□ 0.39
CIITA-211ENST00000576601 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
CIITA-211ENST00000576601 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms