RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 F8W031 263 aaPredicted RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 ZNF280AP59817 542 aaPredicted RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 HDLBPQ00341 1268 aaKnown RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 MAP3K12Q12852 859 aa20.73■□□□□ 0.91
NUP88-210ENST00000574867 TTC22Q5TAA0 569 aa20.73■□□□□ 0.91
NUP88-210ENST00000574867 RAI14Q9P0K7 980 aa20.73■□□□□ 0.91
NUP88-210ENST00000574867 CNOT7Q9UIV1 285 aaKnown RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 IDH1O75874 414 aaKnown RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 GRIK5Q16478 980 aa20.73■□□□□ 0.91
NUP88-210ENST00000574867 EDC3Q96F86 508 aaKnown RBP20.73■□□□□ 0.91
NUP88-210ENST00000574867 AK9Q5TCS8 1911 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 H7C1D1 291 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 RGS3P49796 1198 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 SLF2Q8IX21 1173 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 KBTBD3Q8NAB2 608 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 EVI5LQ96CN4 794 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
NUP88-210ENST00000574867 HACL1Q9UJ83 578 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 SERPINA10Q9UK55 444 aa20.72■□□□□ 0.91
NUP88-210ENST00000574867 GSTO1P78417 241 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 NSUN4Q96CB9 384 aaKnown RBP20.71■□□□□ 0.91
NUP88-210ENST00000574867 MRIQ9BWK5 157 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 MECOMQ03112 1051 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 LRRFIP1Q32MZ4 808 aaKnown RBP20.71■□□□□ 0.91
NUP88-210ENST00000574867 SKAP1Q86WV1 359 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 TEKT1Q969V4 418 aa20.71■□□□□ 0.91
NUP88-210ENST00000574867 MYH2Q9UKX2 1941 aa20.7■□□□□ 0.9
NUP88-210ENST00000574867 TRIM6-TRIM34B2RNG4 842 aa20.7■□□□□ 0.9
NUP88-210ENST00000574867 MAP4K4O95819 1239 aaPredicted RBP20.7■□□□□ 0.9
NUP88-210ENST00000574867 TICAM2Q86XR7 235 aa20.7■□□□□ 0.9
NUP88-210ENST00000574867 RFX7Q2KHR2 1363 aa20.7■□□□□ 0.9
NUP88-210ENST00000574867 ADAMTSL1Q8N6G6 1762 aa20.7■□□□□ 0.9
NUP88-210ENST00000574867 YY1P25490 414 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 EPS15P42566 896 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 ZSCAN25Q6NSZ9 544 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 HHIPL2Q6UWX4 724 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 MYOZ2Q9NPC6 264 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 ADARB2Q9NS39 739 aaKnown RBP20.69■□□□□ 0.9
NUP88-210ENST00000574867 GSPT1P15170 499 aaKnown RBP20.69■□□□□ 0.9
NUP88-210ENST00000574867 CRKP46108 304 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 MTMR14Q8NCE2 650 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 FSD1Q9BTV5 496 aa20.69■□□□□ 0.9
NUP88-210ENST00000574867 LDHCP07864 332 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 VEGFAP15692 232 aaPredicted RBP20.68■□□□□ 0.9
NUP88-210ENST00000574867 NAA16Q6N069 864 aaPredicted RBP20.68■□□□□ 0.9
NUP88-210ENST00000574867 MROH7-TTC4A0A0A0MT08 1334 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 SHTN1A0MZ66 631 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 EPHX2P34913 555 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 DIXDC1Q155Q3 683 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 KIF4BQ2VIQ3 1234 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 SLC9C2Q5TAH2 1124 aa20.68■□□□□ 0.9
NUP88-210ENST00000574867 ZNF526Q8TF50 670 aaPredicted RBP20.68■□□□□ 0.9
NUP88-210ENST00000574867 ECM29Q5VYK3 1845 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 GAKO14976 1311 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 POTECB2RU33 542 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 ZFYP08048 801 aaPredicted RBP20.67■□□□□ 0.9
NUP88-210ENST00000574867 PDE6AP16499 860 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 CFAP100Q494V2 611 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 MAGEB6Q8N7X4 407 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 ZNF384Q8TF68 577 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 RILPL2Q969X0 211 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 FAM163AQ96GL9 167 aaPredicted RBP20.67■□□□□ 0.9
NUP88-210ENST00000574867 ZDHHC15Q96MV8 337 aa20.67■□□□□ 0.9
NUP88-210ENST00000574867 TAF1DQ9H5J8 278 aaPredicted RBP20.67■□□□□ 0.9
NUP88-210ENST00000574867 RBM5P52756 815 aaKnown RBP eCLIP20.66■□□□□ 0.9
NUP88-210ENST00000574867 DLGAP5Q15398 846 aa20.66■□□□□ 0.9
NUP88-210ENST00000574867 BMP2KLQ5H9B9 411 aa20.66■□□□□ 0.9
NUP88-210ENST00000574867 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
NUP88-210ENST00000574867 GPBP1L1Q9HC44 474 aaPredicted RBP20.66■□□□□ 0.9
NUP88-210ENST00000574867 ADD2P35612 726 aa20.66■□□□□ 0.9
NUP88-210ENST00000574867 SAMD7Q7Z3H4 446 aa20.66■□□□□ 0.9
NUP88-210ENST00000574867 PNMA8AQ86V59 439 aaPredicted RBP20.66■□□□□ 0.9
NUP88-210ENST00000574867 SPDYE2BA6NHP3 402 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 SPDYE6P0CI01 402 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 UBE3CQ15386 1083 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 RRAGCQ9HB90 399 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 NMRK2Q9NPI5 230 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 DAGLAQ9Y4D2 1042 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 SDSP20132 328 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 CYP7A1P22680 504 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 TBC1D10BQ4KMP7 808 aaPredicted RBP20.65■□□□□ 0.9
NUP88-210ENST00000574867 TRPM4Q8TD43 1214 aa20.65■□□□□ 0.9
NUP88-210ENST00000574867 ZBED3Q96IU2 234 aaPredicted RBP20.65■□□□□ 0.9
NUP88-210ENST00000574867 ZNF532Q9HCE3 1301 aa20.64■□□□□ 0.89
NUP88-210ENST00000574867 NOL10Q9BSC4 688 aaKnown RBP20.64■□□□□ 0.89
NUP88-210ENST00000574867 TCRBV5S4A2TA0A5A2 114 aa20.63■□□□□ 0.89
NUP88-210ENST00000574867 RNF113AO15541 343 aaKnown RBP20.63■□□□□ 0.89
NUP88-210ENST00000574867 CERS3Q8IU89 383 aa20.63■□□□□ 0.89
NUP88-210ENST00000574867 WNT10BO00744 389 aa20.63■□□□□ 0.89
NUP88-210ENST00000574867 MYO1BO43795 1136 aa20.63■□□□□ 0.89
NUP88-210ENST00000574867 EGFRP00533 1210 aa20.63■□□□□ 0.89
NUP88-210ENST00000574867 RBM26Q5T8P6 1007 aaKnown RBP20.63■□□□□ 0.89
NUP88-210ENST00000574867 GPR75-ASB3A0A0A6YYF3 556 aa20.62■□□□□ 0.89
NUP88-210ENST00000574867 HIP1O00291 1037 aa20.62■□□□□ 0.89
NUP88-210ENST00000574867 BAG3O95817 575 aa20.62■□□□□ 0.89
NUP88-210ENST00000574867 APOBEC3HQ6NTF7 200 aaKnown RBP20.62■□□□□ 0.89
NUP88-210ENST00000574867 BTDP43251 543 aa20.62■□□□□ 0.89
NUP88-210ENST00000574867 ADGRA1Q86SQ6 560 aa20.62■□□□□ 0.89
NUP88-210ENST00000574867 APPBP2Q92624 585 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms