RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 ZNF296Q8WUU4 475 aaPredicted RBP24.22■■□□□ 1.47
HCFC1R1-204ENST00000573095 SLC10A4Q96EP9 437 aa24.22■■□□□ 1.47
HCFC1R1-204ENST00000573095 WNK4Q96J92 1243 aa24.22■■□□□ 1.47
HCFC1R1-204ENST00000573095 CLMNQ96JQ2 1002 aa24.22■■□□□ 1.47
HCFC1R1-204ENST00000573095 TDRD3Q9H7E2 651 aaKnown RBP24.22■■□□□ 1.47
HCFC1R1-204ENST00000573095 EYA2O00167 538 aa24.21■■□□□ 1.47
HCFC1R1-204ENST00000573095 HDLBPQ00341 1268 aaKnown RBP24.21■■□□□ 1.47
HCFC1R1-204ENST00000573095 GRIK5Q16478 980 aa24.21■■□□□ 1.47
HCFC1R1-204ENST00000573095 GPR25O00155 361 aa24.2■■□□□ 1.46
HCFC1R1-204ENST00000573095 FRAT2O75474 233 aaPredicted RBP24.2■■□□□ 1.46
HCFC1R1-204ENST00000573095 ALDH1A1P00352 501 aa24.2■■□□□ 1.46
HCFC1R1-204ENST00000573095 IFIT1P09914 478 aaKnown RBP24.2■■□□□ 1.46
HCFC1R1-204ENST00000573095 USP2O75604 605 aaPredicted RBP24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 UBTFL1P0CB47 393 aaPredicted RBP24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 BCAMP50895 628 aa24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 INHBEP58166 350 aa24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 ANKRD13AQ8IZ07 590 aa24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 TEPSINQ96N21 525 aa24.19■■□□□ 1.46
HCFC1R1-204ENST00000573095 MAST3O60307 1309 aa24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 TNNI2P48788 182 aa24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 PKN2Q16513 984 aaKnown RBP24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 TEKT1Q969V4 418 aa24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 API5Q9BZZ5 524 aaKnown RBP24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 FBXO3Q9UK99 471 aa24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 SUGT1Q9Y2Z0 365 aa24.18■■□□□ 1.46
HCFC1R1-204ENST00000573095 SLC5A1P13866 664 aa24.17■■□□□ 1.46
HCFC1R1-204ENST00000573095 IFNL1Q8IU54 200 aa24.17■■□□□ 1.46
HCFC1R1-204ENST00000573095 LPIN2Q92539 896 aa24.17■■□□□ 1.46
HCFC1R1-204ENST00000573095 NOB1Q9ULX3 412 aaKnown RBP24.17■■□□□ 1.46
HCFC1R1-204ENST00000573095 TCP10L2B9ZVM9 353 aa24.16■■□□□ 1.46
HCFC1R1-204ENST00000573095 ATG9AQ7Z3C6 839 aa24.16■■□□□ 1.46
HCFC1R1-204ENST00000573095 CDAN1Q8IWY9 1227 aa24.16■■□□□ 1.46
HCFC1R1-204ENST00000573095 ZDHHC15Q96MV8 337 aa24.16■■□□□ 1.46
HCFC1R1-204ENST00000573095 MRIQ9BWK5 157 aa24.16■■□□□ 1.46
HCFC1R1-204ENST00000573095 FKTNO75072 461 aa24.15■■□□□ 1.46
HCFC1R1-204ENST00000573095 CIAO1O76071 339 aa24.15■■□□□ 1.46
HCFC1R1-204ENST00000573095 GJA5P36382 358 aa24.15■■□□□ 1.46
HCFC1R1-204ENST00000573095 TMEM39BQ9GZU3 492 aa24.15■■□□□ 1.46
HCFC1R1-204ENST00000573095 R3HDMLQ9H3Y0 253 aa24.15■■□□□ 1.46
HCFC1R1-204ENST00000573095 IGF2BP3O00425 579 aaKnown RBP eCLIP24.14■■□□□ 1.45
HCFC1R1-204ENST00000573095 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.14■■□□□ 1.45
HCFC1R1-204ENST00000573095 HPS5Q9UPZ3 1129 aa24.14■■□□□ 1.45
HCFC1R1-204ENST00000573095 HDAC5Q9UQL6 1122 aa24.14■■□□□ 1.45
HCFC1R1-204ENST00000573095 RPAP1Q9BWH6 1393 aaPredicted RBP24.14■■□□□ 1.45
HCFC1R1-204ENST00000573095 RARSP54136 660 aaKnown RBP24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 FKBP1CQ5VVH2 108 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 HHIPL2Q6UWX4 724 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.12■■□□□ 1.453e-9■■■□□ 16.8
HCFC1R1-204ENST00000573095 WDR66Q8TBY9 1149 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 SIL1Q9H173 461 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 ELP3Q9H9T3 547 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 TMOD2Q9NZR1 351 aa24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 LRRFIP2Q9Y608 721 aaKnown RBP24.12■■□□□ 1.45
HCFC1R1-204ENST00000573095 TESPA1A2RU30 521 aaPredicted RBP24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 SOX10P56693 466 aa24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 ATP2B3Q16720 1220 aa24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 APOBEC3HQ6NTF7 200 aaKnown RBP24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 FBXO46Q6PJ61 603 aaPredicted RBP24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 FAM83AQ86UY5 434 aa24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 OPTNQ96CV9 577 aa24.11■■□□□ 1.45
HCFC1R1-204ENST00000573095 CACNB3P54284 484 aa24.1■■□□□ 1.45
HCFC1R1-204ENST00000573095 ARHGAP45Q92619 1136 aa24.1■■□□□ 1.45
HCFC1R1-204ENST00000573095 MEIS3Q99687 375 aa24.1■■□□□ 1.45
HCFC1R1-204ENST00000573095 CEP126Q9P2H0 1117 aa24.1■■□□□ 1.45
HCFC1R1-204ENST00000573095 IL15P40933 162 aaPredicted RBP24.09■■□□□ 1.45
HCFC1R1-204ENST00000573095 VGLL4Q14135 290 aa24.09■■□□□ 1.45
HCFC1R1-204ENST00000573095 OTUD7BQ6GQQ9 843 aa24.09■■□□□ 1.45
HCFC1R1-204ENST00000573095 COPRSQ9NQ92 184 aa24.09■■□□□ 1.45
HCFC1R1-204ENST00000573095 MAP3K9P80192 1104 aa24.08■■□□□ 1.45
HCFC1R1-204ENST00000573095 INTS3Q68E01 1043 aaKnown RBP24.08■■□□□ 1.45
HCFC1R1-204ENST00000573095 CSADQ9Y600 493 aa24.08■■□□□ 1.45
HCFC1R1-204ENST00000573095 ZBTB22O15209 634 aa24.07■■□□□ 1.44
HCFC1R1-204ENST00000573095 MS4A4AQ96JQ5 239 aa24.07■■□□□ 1.44
HCFC1R1-204ENST00000573095 GNL3LQ9NVN8 582 aaKnown RBP24.07■■□□□ 1.44
HCFC1R1-204ENST00000573095 PA2G4Q9UQ80 394 aaKnown RBP24.07■■□□□ 1.44
HCFC1R1-204ENST00000573095 SALL1Q9NSC2 1324 aa24.07■■□□□ 1.44
HCFC1R1-204ENST00000573095 SEMA3EO15041 775 aa24.06■■□□□ 1.44
HCFC1R1-204ENST00000573095 CRHR2Q13324 411 aa24.06■■□□□ 1.44
HCFC1R1-204ENST00000573095 HOOK2Q96ED9 719 aa24.06■■□□□ 1.44
HCFC1R1-204ENST00000573095 PTPN18Q99952 460 aa24.06■■□□□ 1.44
HCFC1R1-204ENST00000573095 CNKSR2Q8WXI2 1034 aa24.05■■□□□ 1.44
HCFC1R1-204ENST00000573095 DAGLAQ9Y4D2 1042 aa24.05■■□□□ 1.44
HCFC1R1-204ENST00000573095 SPDYE5A6NIY4 337 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 GNAI3P08754 354 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 PRDX5P30044 214 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 GTF2A2P52657 109 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 MTX1Q13505 466 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 DENND2AQ9ULE3 1009 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 SNCAIPQ9Y6H5 919 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 MYH2Q9UKX2 1941 aa24.04■■□□□ 1.44
HCFC1R1-204ENST00000573095 DOCK2Q92608 1830 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 PHKA1P46020 1223 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 DIXDC1Q155Q3 683 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 BRI3BPQ8WY22 251 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 OTUD5Q96G74 571 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 ERO1AQ96HE7 468 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 WRNIP1Q96S55 665 aa24.03■■□□□ 1.44
HCFC1R1-204ENST00000573095 CCL15-CCL14A0A0B4J2E2 113 aa24.02■■□□□ 1.44
HCFC1R1-204ENST00000573095 LDHBP07195 334 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms