RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 NEK9Q8TD19 979 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 CHCHD3Q9NX63 227 aaKnown RBP10.48□□□□□ -0.73
TVP23A-205ENST00000572428 PRR12Q9ULL5 1215 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 ZBTB1Q9Y2K1 713 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 MAP3K15Q6ZN16 1313 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 KIF3CO14782 793 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 GUCY2CP25092 1073 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 CASQ1P31415 396 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 NUCB1Q02818 461 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 KCNV1Q6PIU1 500 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 LZTS2Q9BRK4 669 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 TMX1Q9H3N1 280 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 PICK1Q9NRD5 415 aa10.48□□□□□ -0.73
TVP23A-205ENST00000572428 GNAI3P08754 354 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 LARGE2Q8N3Y3 721 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 NEURL1BA8MQ27 555 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 TRIM66O15016 1216 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 HDLBPQ00341 1268 aaKnown RBP10.47□□□□□ -0.73
TVP23A-205ENST00000572428 PSMD2Q13200 908 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 TTLL7Q6ZT98 887 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 SND1Q7KZF4 910 aaKnown RBP eCLIP10.47□□□□□ -0.73
TVP23A-205ENST00000572428 ISCA1Q9BUE6 129 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 MKS1Q9NXB0 559 aa10.47□□□□□ -0.73
TVP23A-205ENST00000572428 SLC7A5Q01650 507 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 IQCF2Q8IXL9 164 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 RPAP2Q8IXW5 612 aaPredicted RBP10.46□□□□□ -0.73
TVP23A-205ENST00000572428 MEIS3Q99687 375 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 BOLA2-SMG1P6H3BVE0 249 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
TVP23A-205ENST00000572428 PTK7Q13308 1070 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 ZSCAN26Q16670 478 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 RIC3Q7Z5B4 369 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
TVP23A-205ENST00000572428 PCDHGA4Q9Y5G9 962 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 NRXN2Q9P2S2 1712 aa10.46□□□□□ -0.73
TVP23A-205ENST00000572428 CASP7P55210 303 aa10.46□□□□□ -0.74
TVP23A-205ENST00000572428 SLC4A10Q6U841 1118 aa10.46□□□□□ -0.74
TVP23A-205ENST00000572428 GIGYF2Q6Y7W6 1299 aaKnown RBP10.46□□□□□ -0.74
TVP23A-205ENST00000572428 ABCF2Q9UG63 623 aa10.46□□□□□ -0.74
TVP23A-205ENST00000572428 CCNL1Q9UK58 526 aaPredicted RBP10.46□□□□□ -0.74
TVP23A-205ENST00000572428 H0YHG0 523 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 TNNT3P45378 269 aaPredicted RBP10.45□□□□□ -0.74
TVP23A-205ENST00000572428 SARNPP82979 210 aaKnown RBP10.45□□□□□ -0.74
TVP23A-205ENST00000572428 MTX1Q13505 466 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 MNS1Q8NEH6 495 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 A0A087WZG4 1122 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 RPS6KA4O75676 772 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 TRIM37O94972 964 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 TRPC1P48995 793 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 AIMP1Q12904 312 aaKnown RBP10.45□□□□□ -0.74
TVP23A-205ENST00000572428 TCIRG1Q13488 830 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 GCKRQ14397 625 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 CHD1LQ86WJ1 897 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 PROM2Q8N271 834 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 LRRC4BQ9NT99 713 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 RRM1P23921 792 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 PSMC1P62191 440 aaKnown RBP10.45□□□□□ -0.74
TVP23A-205ENST00000572428 CEP85Q6P2H3 762 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 CCDC191Q8NCU4 936 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 TOMM22Q9NS69 142 aa10.45□□□□□ -0.74
TVP23A-205ENST00000572428 RABL2AQ9UBK7 228 aaPredicted RBP10.45□□□□□ -0.74
TVP23A-205ENST00000572428 EP400Q96L91 3159 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 CAMTA2O94983 1202 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 GNAI2P04899 355 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 KCNA2P16389 499 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 ZNF16P17020 682 aaPredicted RBP10.44□□□□□ -0.74
TVP23A-205ENST00000572428 TSNAXIP1Q2TAA8 658 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 NAALADL2Q58DX5 795 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 KIF6Q6ZMV9 814 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 RSPH14Q9UHP6 348 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 H7C1W4 665 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 ZNF771Q7L3S4 317 aaPredicted RBP10.44□□□□□ -0.74
TVP23A-205ENST00000572428 ZNF34Q8IZ26 560 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 YIPF2Q9BWQ6 316 aa10.44□□□□□ -0.74
TVP23A-205ENST00000572428 GRM8O00222 908 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 MYD88Q99836 296 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 BRMS1Q9HCU9 246 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 A0A1B0GUL6 1792 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 NBPF7P0C2Y1 421 aaPredicted RBP10.43□□□□□ -0.74
TVP23A-205ENST00000572428 XBP1P17861 261 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 CWF19L2Q2TBE0 894 aaKnown RBP10.43□□□□□ -0.74
TVP23A-205ENST00000572428 KIF3AQ9Y496 699 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 STK25O00506 426 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 SLC27A2O14975 620 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 ATP8B2P98198 1209 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 POU5F1Q01860 360 aaKnown RBP10.43□□□□□ -0.74
TVP23A-205ENST00000572428 BECN1Q14457 450 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 CC2D1AQ6P1N0 951 aaPredicted RBP10.43□□□□□ -0.74
TVP23A-205ENST00000572428 FAM163AQ96GL9 167 aaPredicted RBP10.43□□□□□ -0.74
TVP23A-205ENST00000572428 KAZALD1Q96I82 304 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 AK7Q96M32 723 aa10.43□□□□□ -0.74
TVP23A-205ENST00000572428 CDHR2Q9BYE9 1310 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 CBFA2T2O43439 604 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
TVP23A-205ENST00000572428 TBC1D32Q96NH3 1257 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 PLA2G12BQ9BX93 195 aa10.42□□□□□ -0.74
TVP23A-205ENST00000572428 LRP5O75197 1615 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms