RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 ARAP2Q8WZ64 1704 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 CRKP46108 304 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 GTF2A2P52657 109 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.99■■□□□ 1.43
SCARF1-204ENST00000570902 ZFYVE28Q9HCC9 887 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 CSADQ9Y600 493 aa23.99■■□□□ 1.43
SCARF1-204ENST00000570902 TCP10L2B9ZVM9 353 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 MAP3K9P80192 1104 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 VGLL4Q14135 290 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 VPS37DQ86XT2 251 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 SRCIN1Q9C0H9 1055 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 MROH5Q6ZUA9 1318 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 CENPFP49454 3210 aa23.98■■□□□ 1.43
SCARF1-204ENST00000570902 TAF1CQ15572 869 aaPredicted RBP23.97■■□□□ 1.43
SCARF1-204ENST00000570902 SLC4A10Q6U841 1118 aa23.97■■□□□ 1.43
SCARF1-204ENST00000570902 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.97■■□□□ 1.43
SCARF1-204ENST00000570902 BRI3BPQ8WY22 251 aa23.97■■□□□ 1.43
SCARF1-204ENST00000570902 TMEM106CQ9BVX2 250 aa23.97■■□□□ 1.43
SCARF1-204ENST00000570902 TMEM39BQ9GZU3 492 aa23.97■■□□□ 1.43
SCARF1-204ENST00000570902 MKI67P46013 3256 aaKnown RBP23.96■■□□□ 1.43
SCARF1-204ENST00000570902 CCL15-CCL14A0A0B4J2E2 113 aa23.96■■□□□ 1.43
SCARF1-204ENST00000570902 WDHD1O75717 1129 aaPredicted RBP23.96■■□□□ 1.43
SCARF1-204ENST00000570902 HDLBPQ00341 1268 aaKnown RBP23.96■■□□□ 1.43
SCARF1-204ENST00000570902 CCL15Q16663 113 aa23.96■■□□□ 1.43
SCARF1-204ENST00000570902 NBPF11Q86T75 865 aa23.96■■□□□ 1.43
SCARF1-204ENST00000570902 TBC1D22AQ8WUA7 517 aa23.96■■□□□ 1.43
SCARF1-204ENST00000570902 EN2P19622 333 aaPredicted RBP23.95■■□□□ 1.42
SCARF1-204ENST00000570902 HABP4Q5JVS0 413 aaKnown RBP23.95■■□□□ 1.42
SCARF1-204ENST00000570902 CDAN1Q8IWY9 1227 aa23.95■■□□□ 1.42
SCARF1-204ENST00000570902 PUS3Q9BZE2 481 aaKnown RBP23.95■■□□□ 1.42
SCARF1-204ENST00000570902 RIPOR2Q9Y4F9 1068 aa23.95■■□□□ 1.42
SCARF1-204ENST00000570902 FRAT2O75474 233 aaPredicted RBP23.94■■□□□ 1.42
SCARF1-204ENST00000570902 CAVIN4Q5BKX8 364 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 FBXO33Q7Z6M2 555 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 CNKSR2Q8WXI2 1034 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 OTUD5Q96G74 571 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 SUCLG2Q96I99 432 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 ZNF333Q96JL9 665 aa23.94■■□□□ 1.42
SCARF1-204ENST00000570902 CAP1Q01518 475 aa23.93■■□□□ 1.42
SCARF1-204ENST00000570902 SLC9C1Q4G0N8 1177 aa23.93■■□□□ 1.42
SCARF1-204ENST00000570902 TEKT1Q969V4 418 aa23.93■■□□□ 1.42
SCARF1-204ENST00000570902 HOOK2Q96ED9 719 aa23.93■■□□□ 1.42
SCARF1-204ENST00000570902 BRCA2P51587 3418 aa23.92■■□□□ 1.42
SCARF1-204ENST00000570902 CHAF1AQ13111 956 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-204ENST00000570902 FAM43AQ8N2R8 423 aa23.92■■□□□ 1.42
SCARF1-204ENST00000570902 KAZALD1Q96I82 304 aa23.92■■□□□ 1.42
SCARF1-204ENST00000570902 ZCCHC17Q9NP64 241 aaKnown RBP23.92■■□□□ 1.42
SCARF1-204ENST00000570902 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
SCARF1-204ENST00000570902 TMOD2Q9NZR1 351 aa23.92■■□□□ 1.42
SCARF1-204ENST00000570902 UTYO14607 1347 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 SPDYE5A6NIY4 337 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 NBPF7P0C2Y1 421 aaPredicted RBP23.91■■□□□ 1.42
SCARF1-204ENST00000570902 CETPP11597 493 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 METTL24Q5JXM2 366 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 MRIQ9BWK5 157 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 IQSEC3Q9UPP2 1182 aaPredicted RBP23.91■■□□□ 1.42
SCARF1-204ENST00000570902 PTCH2Q9Y6C5 1203 aa23.91■■□□□ 1.42
SCARF1-204ENST00000570902 KIF22Q14807 665 aa23.9■■□□□ 1.42
SCARF1-204ENST00000570902 RABL6Q3YEC7 729 aaPredicted RBP23.9■■□□□ 1.42
SCARF1-204ENST00000570902 ERO1BQ86YB8 467 aa23.9■■□□□ 1.42
SCARF1-204ENST00000570902 ZDHHC15Q96MV8 337 aa23.9■■□□□ 1.42
SCARF1-204ENST00000570902 KIAA0100Q14667 2235 aaKnown RBP23.9■■□□□ 1.42
SCARF1-204ENST00000570902 MAST3O60307 1309 aa23.89■■□□□ 1.42
SCARF1-204ENST00000570902 GRIK5Q16478 980 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 SLC4A8Q2Y0W8 1093 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 FKBP1CQ5VVH2 108 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 FAM83AQ86UY5 434 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 WRNIP1Q96S55 665 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 BICC1Q9H694 974 aaKnown RBP23.89■■□□□ 1.41
SCARF1-204ENST00000570902 SUGT1Q9Y2Z0 365 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 SNCAIPQ9Y6H5 919 aa23.89■■□□□ 1.41
SCARF1-204ENST00000570902 TLR2O60603 784 aa23.88■■□□□ 1.41
SCARF1-204ENST00000570902 PDE8BO95263 885 aa23.88■■□□□ 1.41
SCARF1-204ENST00000570902 SNAPC2Q13487 334 aa23.88■■□□□ 1.41
SCARF1-204ENST00000570902 GNRH1P01148 92 aa23.87■■□□□ 1.41
SCARF1-204ENST00000570902 CACNB3P54284 484 aa23.87■■□□□ 1.41
SCARF1-204ENST00000570902 LRRC24Q50LG9 513 aa23.87■■□□□ 1.41
SCARF1-204ENST00000570902 DCAF15Q66K64 600 aa23.87■■□□□ 1.41
SCARF1-204ENST00000570902 ZNF316A6NFI3 1004 aaPredicted RBP23.86■■□□□ 1.41
SCARF1-204ENST00000570902 ANP32CO43423 234 aa23.86■■□□□ 1.41
SCARF1-204ENST00000570902 PPIL2Q13356 520 aa23.86■■□□□ 1.41
SCARF1-204ENST00000570902 VGLL2Q8N8G2 317 aa23.86■■□□□ 1.41
SCARF1-204ENST00000570902 KIF16BQ96L93 1317 aa23.85■■□□□ 1.41
SCARF1-204ENST00000570902 LACTBP83111 547 aaPredicted RBP23.85■■□□□ 1.41
SCARF1-204ENST00000570902 ZKSCAN4Q969J2 545 aaPredicted RBP23.85■■□□□ 1.41
SCARF1-204ENST00000570902 RPAP1Q9BWH6 1393 aaPredicted RBP23.85■■□□□ 1.41
SCARF1-204ENST00000570902 BTBD19C9JJ37 291 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 IRF6O14896 467 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 IFIT1P09914 478 aaKnown RBP23.84■■□□□ 1.41
SCARF1-204ENST00000570902 BCAMP50895 628 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 PRMT2P55345 433 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 APOBEC3HQ6NTF7 200 aaKnown RBP23.84■■□□□ 1.41
SCARF1-204ENST00000570902 HHIPL2Q6UWX4 724 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 ANKRD44Q8N8A2 993 aa23.84■■□□□ 1.41
SCARF1-204ENST00000570902 PPATQ06203 517 aa23.83■■□□□ 1.41
SCARF1-204ENST00000570902 PUM3Q15397 648 aaKnown RBP23.83■■□□□ 1.41
SCARF1-204ENST00000570902 ZNF341Q9BYN7 854 aa23.83■■□□□ 1.41
SCARF1-204ENST00000570902 ARHGAP39Q9C0H5 1083 aa23.82■■□□□ 1.4
SCARF1-204ENST00000570902 SH3TC2Q8TF17 1288 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms