RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
CNOT1-220ENST00000569916 COG6Q9Y2V7 657 aa16.12■□□□□ 0.17
CNOT1-220ENST00000569916 MAST3O60307 1309 aa16.12■□□□□ 0.17
CNOT1-220ENST00000569916 SALL1Q9NSC2 1324 aa16.12■□□□□ 0.17
CNOT1-220ENST00000569916 OTOFQ9HC10 1997 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 RGMBQ6NW40 437 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 MOB2Q70IA6 237 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 DEFB129Q9H1M3 183 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 TDRD3Q9H7E2 651 aaKnown RBP16.11■□□□□ 0.17
CNOT1-220ENST00000569916 VEZTQ9HBM0 779 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 WBP1LQ9NX94 342 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 ZNF70Q9UC06 446 aaPredicted RBP16.11■□□□□ 0.17
CNOT1-220ENST00000569916 DENND2AQ9ULE3 1009 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 DDX19BQ9UMR2 479 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
CNOT1-220ENST00000569916 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
CNOT1-220ENST00000569916 MYH2Q9UKX2 1941 aa16.11■□□□□ 0.17
CNOT1-220ENST00000569916 FAM155AB1AL88 458 aaPredicted RBP16.1■□□□□ 0.17
CNOT1-220ENST00000569916 SURF6O75683 361 aaKnown RBP16.1■□□□□ 0.17
CNOT1-220ENST00000569916 PRDX5P30044 214 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 NF2P35240 595 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 MAP2K2P36507 400 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 ZDHHC15Q96MV8 337 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 NEUROD6Q96NK8 337 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 MRIQ9BWK5 157 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 LAMB1P07942 1786 aa16.1■□□□□ 0.17
CNOT1-220ENST00000569916 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
CNOT1-220ENST00000569916 MAST2Q6P0Q8 1798 aa16.09■□□□□ 0.17
CNOT1-220ENST00000569916 FOXN1O15353 648 aa16.09■□□□□ 0.17
CNOT1-220ENST00000569916 MAP2K1Q02750 393 aaPredicted RBP16.09■□□□□ 0.17
CNOT1-220ENST00000569916 GPR108Q9NPR9 543 aa16.09■□□□□ 0.17
CNOT1-220ENST00000569916 SLC10A3P09131 477 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 ZNF157P51786 506 aaPredicted RBP16.08■□□□□ 0.16
CNOT1-220ENST00000569916 NOGQ13253 232 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
CNOT1-220ENST00000569916 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 HHIPL2Q6UWX4 724 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
CNOT1-220ENST00000569916 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 LDHBP07195 334 aaKnown RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 ARID4AP29374 1257 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 TNFAIP1Q13829 316 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 TTLL12Q14166 644 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 RASA3Q14644 834 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 TNNI3KQ59H18 835 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 APOBEC3HQ6NTF7 200 aaKnown RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 RASAL3Q86YV0 1011 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 CCDC102AQ96A19 550 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 AIDAQ96BJ3 306 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 FPGT-TNNI3KV9GXZ4 949 aa16.07■□□□□ 0.16
CNOT1-220ENST00000569916 MYO5AQ9Y4I1 1855 aaKnown RBP16.07■□□□□ 0.16
CNOT1-220ENST00000569916 PRKG1Q13976 671 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 DIXDC1Q155Q3 683 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 GORABQ5T7V8 394 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 ZGPATQ8N5A5 531 aaKnown RBP16.06■□□□□ 0.16
CNOT1-220ENST00000569916 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
CNOT1-220ENST00000569916 FZD1Q9UP38 647 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 EXOC6BQ9Y2D4 811 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 DAGLAQ9Y4D2 1042 aa16.06■□□□□ 0.16
CNOT1-220ENST00000569916 TCP10L2B9ZVM9 353 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 CACNB3P54284 484 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 MAP3K11Q16584 847 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 NBPF12Q5TAG4 269 aaPredicted RBP16.05■□□□□ 0.16
CNOT1-220ENST00000569916 PI16Q6UXB8 463 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 CDAN1Q8IWY9 1227 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 SIRT2Q8IXJ6 389 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
CNOT1-220ENST00000569916 TEPSINQ96N21 525 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
CNOT1-220ENST00000569916 ANGEL1Q9UNK9 670 aaKnown RBP16.05■□□□□ 0.16
CNOT1-220ENST00000569916 DOCK2Q92608 1830 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 MCAMP43121 646 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 TNNI2P48788 182 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 CTCFP49711 727 aaPredicted RBP16.04■□□□□ 0.16
CNOT1-220ENST00000569916 SUPT20HL1Q3ZLR7 823 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 LDLRAD1Q5T700 205 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 COL13A1Q5TAT6 717 aaPredicted RBP16.04■□□□□ 0.16
CNOT1-220ENST00000569916 ARMC9Q7Z3E5 817 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 SPATA5Q8NB90 893 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 TMEM39BQ9GZU3 492 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 CHMP4BQ9H444 224 aaKnown RBP16.04■□□□□ 0.16
CNOT1-220ENST00000569916 ABCF2Q9UG63 623 aa16.04■□□□□ 0.16
CNOT1-220ENST00000569916 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
CNOT1-220ENST00000569916 GAKO14976 1311 aa16.03■□□□□ 0.16
CNOT1-220ENST00000569916 UQCRFS1P1P0C7P4 283 aa16.03■□□□□ 0.16
CNOT1-220ENST00000569916 HSPA8P11142 646 aaKnown RBP16.03■□□□□ 0.16
CNOT1-220ENST00000569916 KIF23Q02241 960 aaPredicted RBP16.03■□□□□ 0.16
CNOT1-220ENST00000569916 FKBP1CQ5VVH2 108 aa16.03■□□□□ 0.16
CNOT1-220ENST00000569916 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
CNOT1-220ENST00000569916 TMOD2Q9NZR1 351 aa16.03■□□□□ 0.16
CNOT1-220ENST00000569916 DBNLQ9UJU6 430 aaKnown RBP16.03■□□□□ 0.16
CNOT1-220ENST00000569916 PPP1R12BO60237 982 aaPredicted RBP16.02■□□□□ 0.16
CNOT1-220ENST00000569916 KCNA4P22459 653 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms