RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 CCDC102AQ96A19 550 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 ZIC5Q96T25 663 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 TDRD3Q9H7E2 651 aaKnown RBP21.71■■□□□ 1.07
EDC3-215ENST00000569007 AKAP2Q9Y2D5 859 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 SUGT1Q9Y2Z0 365 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.71■■□□□ 1.07
EDC3-215ENST00000569007 ECM29Q5VYK3 1845 aa21.71■■□□□ 1.07
EDC3-215ENST00000569007 A0A1B0GUL7 405 aa21.7■■□□□ 1.06
EDC3-215ENST00000569007 CTCFP49711 727 aaPredicted RBP21.7■■□□□ 1.06
EDC3-215ENST00000569007 HDLBPQ00341 1268 aaKnown RBP21.7■■□□□ 1.06
EDC3-215ENST00000569007 SPDYE2Q495Y8 402 aa21.7■■□□□ 1.06
EDC3-215ENST00000569007 CCDC102BQ68D86 513 aa21.7■■□□□ 1.06
EDC3-215ENST00000569007 SSH3Q8TE77 659 aa21.7■■□□□ 1.06
EDC3-215ENST00000569007 ZNF70Q9UC06 446 aaPredicted RBP21.7■■□□□ 1.06
EDC3-215ENST00000569007 MS4A1P11836 297 aa21.69■■□□□ 1.06
EDC3-215ENST00000569007 TEKT1Q969V4 418 aa21.69■■□□□ 1.06
EDC3-215ENST00000569007 XAGE2Q96GT9 111 aa21.69■■□□□ 1.06
EDC3-215ENST00000569007 BEGAINQ9BUH8 593 aa21.69■■□□□ 1.06
EDC3-215ENST00000569007 PPP2R3BQ9Y5P8 575 aa21.69■■□□□ 1.06
EDC3-215ENST00000569007 MYH13Q9UKX3 1938 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 SEMA3EO15041 775 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 SLC10A3P09131 477 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 PRKG1Q13976 671 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 RASA3Q14644 834 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 MRIQ9BWK5 157 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 DENND2AQ9ULE3 1009 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 MAST3O60307 1309 aa21.68■■□□□ 1.06
EDC3-215ENST00000569007 ZDHHC15Q96MV8 337 aa21.67■■□□□ 1.06
EDC3-215ENST00000569007 NEUROD6Q96NK8 337 aa21.67■■□□□ 1.06
EDC3-215ENST00000569007 HSPA8P11142 646 aaKnown RBP21.66■■□□□ 1.06
EDC3-215ENST00000569007 TNFAIP1Q13829 316 aa21.66■■□□□ 1.06
EDC3-215ENST00000569007 MVPQ14764 893 aaKnown RBP21.66■■□□□ 1.06
EDC3-215ENST00000569007 ARMC9Q7Z3E5 817 aa21.66■■□□□ 1.06
EDC3-215ENST00000569007 RASAL3Q86YV0 1011 aa21.66■■□□□ 1.06
EDC3-215ENST00000569007 SSC5DA1L4H1 1573 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 ZBTB22O15209 634 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 SURF6O75683 361 aaKnown RBP21.65■■□□□ 1.06
EDC3-215ENST00000569007 PRDX5P30044 214 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 LBX1P52954 281 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
EDC3-215ENST00000569007 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
EDC3-215ENST00000569007 RASGRF1Q13972 1273 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 SUPT20HL1Q3ZLR7 823 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 NBPF12Q5TAG4 269 aaPredicted RBP21.65■■□□□ 1.06
EDC3-215ENST00000569007 HHIPL2Q6UWX4 724 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 ANGEL1Q9UNK9 670 aaKnown RBP21.65■■□□□ 1.06
EDC3-215ENST00000569007 FZD1Q9UP38 647 aa21.65■■□□□ 1.06
EDC3-215ENST00000569007 SALL1Q9NSC2 1324 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 TCP10L2B9ZVM9 353 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 LDHBP07195 334 aaKnown RBP21.64■■□□□ 1.05
EDC3-215ENST00000569007 GORABQ5T7V8 394 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 APOBEC3HQ6NTF7 200 aaKnown RBP21.64■■□□□ 1.05
EDC3-215ENST00000569007 CEP85Q6P2H3 762 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 PRDM10Q9NQV6 1147 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 COG6Q9Y2V7 657 aa21.64■■□□□ 1.05
EDC3-215ENST00000569007 CACNB3P54284 484 aa21.63■■□□□ 1.05
EDC3-215ENST00000569007 DIXDC1Q155Q3 683 aa21.63■■□□□ 1.05
EDC3-215ENST00000569007 TSKSQ9UJT2 592 aa21.63■■□□□ 1.05
EDC3-215ENST00000569007 NOP58Q9Y2X3 529 aaKnown RBP21.63■■□□□ 1.05
EDC3-215ENST00000569007 PDS5AQ29RF7 1337 aaKnown RBP21.62■■□□□ 1.05
EDC3-215ENST00000569007 PPP1R12BO60237 982 aaPredicted RBP21.62■■□□□ 1.05
EDC3-215ENST00000569007 LDLRAD1Q5T700 205 aa21.62■■□□□ 1.05
EDC3-215ENST00000569007 TMEM39BQ9GZU3 492 aa21.62■■□□□ 1.05
EDC3-215ENST00000569007 CA12O43570 354 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 TNNI2P48788 182 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 CDAN1Q8IWY9 1227 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 ZGPATQ8N5A5 531 aaKnown RBP21.61■■□□□ 1.05
EDC3-215ENST00000569007 TEPSINQ96N21 525 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 GPR108Q9NPR9 543 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 TMOD2Q9NZR1 351 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 DDX19BQ9UMR2 479 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 DAGLAQ9Y4D2 1042 aa21.61■■□□□ 1.05
EDC3-215ENST00000569007 MAP3K11Q16584 847 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 TNNI3KQ59H18 835 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 TNS4Q8IZW8 715 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 CSRNP1Q96S65 589 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 HMG20BQ9P0W2 317 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 ABCF2Q9UG63 623 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 FPGT-TNNI3KV9GXZ4 949 aa21.6■■□□□ 1.05
EDC3-215ENST00000569007 IFFO2Q5TF58 517 aa21.59■■□□□ 1.05
EDC3-215ENST00000569007 FKBP1CQ5VVH2 108 aa21.59■■□□□ 1.05
EDC3-215ENST00000569007 ZBTB40Q9NUA8 1239 aa21.59■■□□□ 1.05
EDC3-215ENST00000569007 USP2O75604 605 aaPredicted RBP21.58■■□□□ 1.05
EDC3-215ENST00000569007 ARID4AP29374 1257 aaPredicted RBP21.58■■□□□ 1.05
EDC3-215ENST00000569007 C20orf194Q5TEA3 1177 aa21.58■■□□□ 1.05
EDC3-215ENST00000569007 PI16Q6UXB8 463 aa21.58■■□□□ 1.05
EDC3-215ENST00000569007 SPATA5Q8NB90 893 aa21.58■■□□□ 1.05
EDC3-215ENST00000569007 CLMNQ96JQ2 1002 aa21.58■■□□□ 1.05
EDC3-215ENST00000569007 DBNDD2Q9BQY9 259 aa21.58■■□□□ 1.05
EDC3-215ENST00000569007 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
EDC3-215ENST00000569007 UQCRFS1P1P0C7P4 283 aa21.57■■□□□ 1.04
EDC3-215ENST00000569007 MKRN3Q13064 507 aaKnown RBP21.57■■□□□ 1.04
EDC3-215ENST00000569007 SPTY2D1Q68D10 685 aaPredicted RBP21.57■■□□□ 1.04
EDC3-215ENST00000569007 CDC42EP5Q6NZY7 148 aa21.57■■□□□ 1.04
EDC3-215ENST00000569007 FAM83AQ86UY5 434 aa21.57■■□□□ 1.04
EDC3-215ENST00000569007 DZIP1Q86YF9 867 aaKnown RBP21.57■■□□□ 1.04
EDC3-215ENST00000569007 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.57■■□□□ 1.04
EDC3-215ENST00000569007 SLC10A4Q96EP9 437 aa21.57■■□□□ 1.04
EDC3-215ENST00000569007 EXOC6BQ9Y2D4 811 aa21.57■■□□□ 1.04
EDC3-215ENST00000569007 IREB2P48200 963 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms