RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MRS2Q9HD23 443 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 CSADQ9Y600 493 aa19.89■□□□□ 0.77
HERPUD1-215ENST00000568676 AOX1Q06278 1338 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 CRKP46108 304 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 GYG1P46976 350 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 MAP3K9P80192 1104 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 NBPF11Q86T75 865 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 VPS37DQ86XT2 251 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 HOOK2Q96ED9 719 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 TEPSINQ96N21 525 aa19.88■□□□□ 0.77
HERPUD1-215ENST00000568676 POTEFA5A3E0 1075 aa19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 CAVIN4Q5BKX8 364 aa19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 TMEM106CQ9BVX2 250 aa19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 MRIQ9BWK5 157 aa19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 ZCCHC17Q9NP64 241 aaKnown RBP19.87■□□□□ 0.77
HERPUD1-215ENST00000568676 OTOFQ9HC10 1997 aa19.86■□□□□ 0.77
HERPUD1-215ENST00000568676 TAF1CQ15572 869 aaPredicted RBP19.86■□□□□ 0.77
HERPUD1-215ENST00000568676 RIPOR2Q9Y4F9 1068 aa19.86■□□□□ 0.77
HERPUD1-215ENST00000568676 HTTP42858 3142 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 UTYO14607 1347 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 CCL15-CCL14A0A0B4J2E2 113 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 TCP10L2B9ZVM9 353 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 VGLL4Q14135 290 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 CCL15Q16663 113 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 SLC4A10Q6U841 1118 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 FBXO33Q7Z6M2 555 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 BRI3BPQ8WY22 251 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 TEKT1Q969V4 418 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 TMEM39BQ9GZU3 492 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 TMOD2Q9NZR1 351 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 SUGT1Q9Y2Z0 365 aa19.85■□□□□ 0.77
HERPUD1-215ENST00000568676 MAST3O60307 1309 aa19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 RABL6Q3YEC7 729 aaPredicted RBP19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 FKBP1CQ5VVH2 108 aa19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 FAM83AQ86UY5 434 aa19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 ZNF333Q96JL9 665 aa19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
HERPUD1-215ENST00000568676 KIF16BQ96L93 1317 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 SPDYE5A6NIY4 337 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 FRAT2O75474 233 aaPredicted RBP19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 GNRH1P01148 92 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 CETPP11597 493 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 SLC9C1Q4G0N8 1177 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 ERO1BQ86YB8 467 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 SUCLG2Q96I99 432 aa19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 PUS3Q9BZE2 481 aaKnown RBP19.83■□□□□ 0.77
HERPUD1-215ENST00000568676 KIF22Q14807 665 aa19.82■□□□□ 0.76
HERPUD1-215ENST00000568676 HABP4Q5JVS0 413 aaKnown RBP19.82■□□□□ 0.76
HERPUD1-215ENST00000568676 OTUD5Q96G74 571 aa19.82■□□□□ 0.76
HERPUD1-215ENST00000568676 KAZALD1Q96I82 304 aa19.82■□□□□ 0.76
HERPUD1-215ENST00000568676 ZDHHC15Q96MV8 337 aa19.82■□□□□ 0.76
HERPUD1-215ENST00000568676 ANP32CO43423 234 aa19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 PDE8BO95263 885 aa19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 NBPF7P0C2Y1 421 aaPredicted RBP19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 PRMT2P55345 433 aa19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 METTL24Q5JXM2 366 aa19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 DCAF15Q66K64 600 aa19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 RPAP1Q9BWH6 1393 aaPredicted RBP19.81■□□□□ 0.76
HERPUD1-215ENST00000568676 TLR2O60603 784 aa19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 EN2P19622 333 aaPredicted RBP19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 SNAPC2Q13487 334 aa19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 CDAN1Q8IWY9 1227 aa19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 FAM43AQ8N2R8 423 aa19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 BICC1Q9H694 974 aaKnown RBP19.8■□□□□ 0.76
HERPUD1-215ENST00000568676 CHAF1AQ13111 956 aaPredicted RBP19.79■□□□□ 0.76
HERPUD1-215ENST00000568676 HHIPL2Q6UWX4 724 aa19.79■□□□□ 0.76
HERPUD1-215ENST00000568676 CNKSR2Q8WXI2 1034 aa19.79■□□□□ 0.76
HERPUD1-215ENST00000568676 WRNIP1Q96S55 665 aa19.79■□□□□ 0.76
HERPUD1-215ENST00000568676 SNCAIPQ9Y6H5 919 aa19.79■□□□□ 0.76
HERPUD1-215ENST00000568676 IFIT1P09914 478 aaKnown RBP19.78■□□□□ 0.76
HERPUD1-215ENST00000568676 PPIL2Q13356 520 aa19.78■□□□□ 0.76
HERPUD1-215ENST00000568676 VGLL2Q8N8G2 317 aa19.78■□□□□ 0.76
HERPUD1-215ENST00000568676 PTCH2Q9Y6C5 1203 aa19.78■□□□□ 0.76
HERPUD1-215ENST00000568676 PTPRCP08575 1304 aa19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 CENPFP49454 3210 aa19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 LACTBP83111 547 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 CAP1Q01518 475 aa19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 PPATQ06203 517 aa19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 PUM3Q15397 648 aaKnown RBP19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 SLC4A8Q2Y0W8 1093 aa19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 IQSEC3Q9UPP2 1182 aaPredicted RBP19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 KIAA0100Q14667 2235 aaKnown RBP19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 MKI67P46013 3256 aaKnown RBP19.77■□□□□ 0.76
HERPUD1-215ENST00000568676 GRIK5Q16478 980 aa19.76■□□□□ 0.75
HERPUD1-215ENST00000568676 LRRC24Q50LG9 513 aa19.76■□□□□ 0.75
HERPUD1-215ENST00000568676 APOBEC3HQ6NTF7 200 aaKnown RBP19.76■□□□□ 0.75
HERPUD1-215ENST00000568676 WDR66Q8TBY9 1149 aa19.76■□□□□ 0.75
HERPUD1-215ENST00000568676 ZNF341Q9BYN7 854 aa19.76■□□□□ 0.75
HERPUD1-215ENST00000568676 BTBD19C9JJ37 291 aa19.75■□□□□ 0.75
HERPUD1-215ENST00000568676 IRF6O14896 467 aa19.75■□□□□ 0.75
HERPUD1-215ENST00000568676 ANKRD44Q8N8A2 993 aa19.75■□□□□ 0.75
HERPUD1-215ENST00000568676 FGFR2P21802 821 aa19.74■□□□□ 0.75
HERPUD1-215ENST00000568676 BCAMP50895 628 aa19.74■□□□□ 0.75
HERPUD1-215ENST00000568676 CACNB3P54284 484 aa19.74■□□□□ 0.75
HERPUD1-215ENST00000568676 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
HERPUD1-215ENST00000568676 BRCA2P51587 3418 aa19.74■□□□□ 0.75
HERPUD1-215ENST00000568676 HOXD10P28358 340 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms