RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 CA12O43570 354 aa20.58■□□□□ 0.89
PKD1-233ENST00000567355 NF2P35240 595 aa20.58■□□□□ 0.89
PKD1-233ENST00000567355 RBM5P52756 815 aaKnown RBP eCLIP20.58■□□□□ 0.89
PKD1-233ENST00000567355 KIF23Q02241 960 aaPredicted RBP20.58■□□□□ 0.89
PKD1-233ENST00000567355 ZNF70Q9UC06 446 aaPredicted RBP20.58■□□□□ 0.89
PKD1-233ENST00000567355 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.58■□□□□ 0.89
PKD1-233ENST00000567355 MAP3K11Q16584 847 aa20.57■□□□□ 0.88
PKD1-233ENST00000567355 LDLRAD1Q5T700 205 aa20.57■□□□□ 0.88
PKD1-233ENST00000567355 WDR66Q8TBY9 1149 aa20.57■□□□□ 0.88
PKD1-233ENST00000567355 BEGAINQ9BUH8 593 aa20.57■□□□□ 0.88
PKD1-233ENST00000567355 TDRD3Q9H7E2 651 aaKnown RBP20.57■□□□□ 0.88
PKD1-233ENST00000567355 SEMA3EO15041 775 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 ADORA1P30542 326 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 PHKA1P46020 1223 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 TFCP2Q12800 502 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 POLA2Q14181 598 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 FTSJ3Q8IY81 847 aaKnown RBP20.56■□□□□ 0.88
PKD1-233ENST00000567355 TNS4Q8IZW8 715 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 ZDHHC15Q96MV8 337 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 VEZTQ9HBM0 779 aa20.56■□□□□ 0.88
PKD1-233ENST00000567355 SALL1Q9NSC2 1324 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 TIMM10P62072 90 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 RASA3Q14644 834 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 CCDC102BQ68D86 513 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 SSH3Q8TE77 659 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 TEKT1Q969V4 418 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 CSRNP1Q96S65 589 aa20.55■□□□□ 0.88
PKD1-233ENST00000567355 MAST3O60307 1309 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 A0A1B0GUL7 405 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 NBPF12Q5TAG4 269 aaPredicted RBP20.54■□□□□ 0.88
PKD1-233ENST00000567355 APOBEC3HQ6NTF7 200 aaKnown RBP20.54■□□□□ 0.88
PKD1-233ENST00000567355 HHIPL2Q6UWX4 724 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 ARMC9Q7Z3E5 817 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 TEPSINQ96N21 525 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 GNL3LQ9NVN8 582 aaKnown RBP20.54■□□□□ 0.88
PKD1-233ENST00000567355 AKAP2Q9Y2D5 859 aa20.54■□□□□ 0.88
PKD1-233ENST00000567355 PDS5AQ29RF7 1337 aaKnown RBP20.53■□□□□ 0.88
PKD1-233ENST00000567355 ATP8B2P98198 1209 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 TNFAIP1Q13829 316 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 TTLL12Q14166 644 aaPredicted RBP20.53■□□□□ 0.88
PKD1-233ENST00000567355 SUPT20HL1Q3ZLR7 823 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 REM2Q8IYK8 340 aaPredicted RBP20.53■□□□□ 0.88
PKD1-233ENST00000567355 SAGE1Q9NXZ1 904 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 DENND2AQ9ULE3 1009 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 FZD1Q9UP38 647 aa20.53■□□□□ 0.88
PKD1-233ENST00000567355 UNCXA6NJT0 531 aa20.52■□□□□ 0.88
PKD1-233ENST00000567355 PRKG1Q13976 671 aa20.52■□□□□ 0.88
PKD1-233ENST00000567355 ITPRIPQ8IWB1 547 aa20.52■□□□□ 0.88
PKD1-233ENST00000567355 XAGE2Q96GT9 111 aa20.52■□□□□ 0.88
PKD1-233ENST00000567355 TSKSQ9UJT2 592 aa20.52■□□□□ 0.88
PKD1-233ENST00000567355 ANGEL1Q9UNK9 670 aaKnown RBP20.52■□□□□ 0.88
PKD1-233ENST00000567355 LAMB1P07942 1786 aa20.51■□□□□ 0.87
PKD1-233ENST00000567355 PRDX5P30044 214 aa20.51■□□□□ 0.87
PKD1-233ENST00000567355 RASGRF1Q13972 1273 aa20.51■□□□□ 0.87
PKD1-233ENST00000567355 FKBP1CQ5VVH2 108 aa20.51■□□□□ 0.87
PKD1-233ENST00000567355 C1orf115Q9H7X2 142 aa20.51■□□□□ 0.87
PKD1-233ENST00000567355 PPP1R12BO60237 982 aaPredicted RBP20.5■□□□□ 0.87
PKD1-233ENST00000567355 USP2O75604 605 aaPredicted RBP20.5■□□□□ 0.87
PKD1-233ENST00000567355 CDAN1Q8IWY9 1227 aa20.5■□□□□ 0.87
PKD1-233ENST00000567355 PANK1Q8TE04 598 aa20.5■□□□□ 0.87
PKD1-233ENST00000567355 RNF186Q9NXI6 227 aa20.5■□□□□ 0.87
PKD1-233ENST00000567355 AKAP11Q9UKA4 1901 aa20.5■□□□□ 0.87
PKD1-233ENST00000567355 TCP10L2B9ZVM9 353 aa20.49■□□□□ 0.87
PKD1-233ENST00000567355 G3BP1Q13283 466 aaKnown RBP eCLIP20.49■□□□□ 0.87
PKD1-233ENST00000567355 MVPQ14764 893 aaKnown RBP20.49■□□□□ 0.87
PKD1-233ENST00000567355 TMEM39BQ9GZU3 492 aa20.49■□□□□ 0.87
PKD1-233ENST00000567355 GPR108Q9NPR9 543 aa20.49■□□□□ 0.87
PKD1-233ENST00000567355 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
PKD1-233ENST00000567355 OTOFQ9HC10 1997 aa20.48■□□□□ 0.87
PKD1-233ENST00000567355 TM4SF4P48230 202 aa20.48■□□□□ 0.87
PKD1-233ENST00000567355 TNNI2P48788 182 aa20.48■□□□□ 0.87
PKD1-233ENST00000567355 FAM83AQ86UY5 434 aa20.48■□□□□ 0.87
PKD1-233ENST00000567355 DAGLAQ9Y4D2 1042 aa20.48■□□□□ 0.87
PKD1-233ENST00000567355 LDHBP07195 334 aaKnown RBP20.47■□□□□ 0.87
PKD1-233ENST00000567355 CACNB3P54284 484 aa20.47■□□□□ 0.87
PKD1-233ENST00000567355 DIXDC1Q155Q3 683 aa20.47■□□□□ 0.87
PKD1-233ENST00000567355 SPRYD7Q5W111 196 aa20.47■□□□□ 0.87
PKD1-233ENST00000567355 CEP85Q6P2H3 762 aa20.47■□□□□ 0.87
PKD1-233ENST00000567355 CLMNQ96JQ2 1002 aa20.47■□□□□ 0.87
PKD1-233ENST00000567355 MS4A1P11836 297 aa20.46■□□□□ 0.87
PKD1-233ENST00000567355 ARID4AP29374 1257 aaPredicted RBP20.46■□□□□ 0.87
PKD1-233ENST00000567355 IREB2P48200 963 aaKnown RBP20.46■□□□□ 0.87
PKD1-233ENST00000567355 ZGPATQ8N5A5 531 aaKnown RBP20.46■□□□□ 0.87
PKD1-233ENST00000567355 NEUROD6Q96NK8 337 aa20.46■□□□□ 0.87
PKD1-233ENST00000567355 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
PKD1-233ENST00000567355 RPAP1Q9BWH6 1393 aaPredicted RBP20.46■□□□□ 0.87
PKD1-233ENST00000567355 TRPA1O75762 1119 aa20.45■□□□□ 0.86
PKD1-233ENST00000567355 CDC42EP5Q6NZY7 148 aa20.45■□□□□ 0.86
PKD1-233ENST00000567355 HMG20BQ9P0W2 317 aa20.45■□□□□ 0.86
PKD1-233ENST00000567355 GAKO14976 1311 aa20.45■□□□□ 0.86
PKD1-233ENST00000567355 SURF6O75683 361 aaKnown RBP20.44■□□□□ 0.86
PKD1-233ENST00000567355 ZBTB48P10074 688 aaPredicted RBP20.44■□□□□ 0.86
PKD1-233ENST00000567355 TNNI3KQ59H18 835 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 ANKRD13AQ8IZ07 590 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 SLC10A4Q96EP9 437 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 FAM163AQ96GL9 167 aaPredicted RBP20.44■□□□□ 0.86
PKD1-233ENST00000567355 TMOD2Q9NZR1 351 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 FPGT-TNNI3KV9GXZ4 949 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 CASP8AP2Q9UKL3 1982 aa20.44■□□□□ 0.86
PKD1-233ENST00000567355 MYH2Q9UKX2 1941 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms