RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 BCAMP50895 628 aa18.99■□□□□ 0.63
SMPD3-208ENST00000566723 GRIK5Q16478 980 aa18.99■□□□□ 0.63
SMPD3-208ENST00000566723 SLC10A4Q96EP9 437 aa18.99■□□□□ 0.63
SMPD3-208ENST00000566723 CLMNQ96JQ2 1002 aa18.99■□□□□ 0.63
SMPD3-208ENST00000566723 TBC1D8O95759 1140 aa18.98■□□□□ 0.63
SMPD3-208ENST00000566723 ZBTB48P10074 688 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-208ENST00000566723 RARSP54136 660 aaKnown RBP18.98■□□□□ 0.63
SMPD3-208ENST00000566723 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
SMPD3-208ENST00000566723 ATG9AQ7Z3C6 839 aa18.98■□□□□ 0.63
SMPD3-208ENST00000566723 CTU1Q7Z7A3 348 aaKnown RBP18.98■□□□□ 0.63
SMPD3-208ENST00000566723 WNK4Q96J92 1243 aa18.98■□□□□ 0.63
SMPD3-208ENST00000566723 FBXO3Q9UK99 471 aa18.98■□□□□ 0.63
SMPD3-208ENST00000566723 MAST3O60307 1309 aa18.98■□□□□ 0.63
SMPD3-208ENST00000566723 MANSC4A6NHS7 340 aaPredicted RBP18.97■□□□□ 0.63
SMPD3-208ENST00000566723 CIAO1O76071 339 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 NOM1Q5C9Z4 860 aaKnown RBP18.97■□□□□ 0.63
SMPD3-208ENST00000566723 LPIN2Q92539 896 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 TEKT1Q969V4 418 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 CFHR5Q9BXR6 569 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 HDAC5Q9UQL6 1122 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 SUGT1Q9Y2Z0 365 aa18.97■□□□□ 0.63
SMPD3-208ENST00000566723 USP2O75604 605 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-208ENST00000566723 TNNI2P48788 182 aa18.96■□□□□ 0.63
SMPD3-208ENST00000566723 ZNF296Q8WUU4 475 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-208ENST00000566723 TEPSINQ96N21 525 aa18.96■□□□□ 0.63
SMPD3-208ENST00000566723 SIL1Q9H173 461 aa18.96■□□□□ 0.63
SMPD3-208ENST00000566723 LRRFIP2Q9Y608 721 aaKnown RBP18.96■□□□□ 0.63
SMPD3-208ENST00000566723 TCP10L2B9ZVM9 353 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 ALDH1A1P00352 501 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 RGS19P49795 217 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 CDAN1Q8IWY9 1227 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 ANKRD13AQ8IZ07 590 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 ARHGAP45Q92619 1136 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 ZDHHC15Q96MV8 337 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 MEIS3Q99687 375 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.95■□□□□ 0.62
SMPD3-208ENST00000566723 AK9Q5TCS8 1911 aa18.95■□□□□ 0.62
SMPD3-208ENST00000566723 GPR25O00155 361 aa18.94■□□□□ 0.62
SMPD3-208ENST00000566723 INHBEP58166 350 aa18.94■□□□□ 0.62
SMPD3-208ENST00000566723 ATP2B3Q16720 1220 aa18.94■□□□□ 0.62
SMPD3-208ENST00000566723 MRIQ9BWK5 157 aa18.94■□□□□ 0.62
SMPD3-208ENST00000566723 TMEM39BQ9GZU3 492 aa18.94■□□□□ 0.62
SMPD3-208ENST00000566723 IFNL1Q8IU54 200 aa18.93■□□□□ 0.62
SMPD3-208ENST00000566723 WDR66Q8TBY9 1149 aa18.93■□□□□ 0.62
SMPD3-208ENST00000566723 TMOD2Q9NZR1 351 aa18.93■□□□□ 0.62
SMPD3-208ENST00000566723 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
SMPD3-208ENST00000566723 MYH2Q9UKX2 1941 aa18.93■□□□□ 0.62
SMPD3-208ENST00000566723 GJA5P36382 358 aa18.92■□□□□ 0.62
SMPD3-208ENST00000566723 IL15P40933 162 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-208ENST00000566723 CACNB3P54284 484 aa18.92■□□□□ 0.62
SMPD3-208ENST00000566723 MLLT1Q03111 559 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-208ENST00000566723 INTS3Q68E01 1043 aaKnown RBP18.92■□□□□ 0.62
SMPD3-208ENST00000566723 PA2G4Q9UQ80 394 aaKnown RBP18.92■□□□□ 0.62
SMPD3-208ENST00000566723 RPAP1Q9BWH6 1393 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-208ENST00000566723 IGF2BP3O00425 579 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMPD3-208ENST00000566723 FKTNO75072 461 aa18.91■□□□□ 0.62
SMPD3-208ENST00000566723 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
SMPD3-208ENST00000566723 APOBEC3HQ6NTF7 200 aaKnown RBP18.91■□□□□ 0.62
SMPD3-208ENST00000566723 HHIPL2Q6UWX4 724 aa18.91■□□□□ 0.62
SMPD3-208ENST00000566723 R3HDMLQ9H3Y0 253 aa18.91■□□□□ 0.62
SMPD3-208ENST00000566723 ELP3Q9H9T3 547 aa18.91■□□□□ 0.62
SMPD3-208ENST00000566723 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
SMPD3-208ENST00000566723 HTTP42858 3142 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 GNAI3P08754 354 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 FKBP1CQ5VVH2 108 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-208ENST00000566723 FAM83AQ86UY5 434 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 OPTNQ96CV9 577 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 GNL3LQ9NVN8 582 aaKnown RBP18.9■□□□□ 0.62
SMPD3-208ENST00000566723 PDE4DIPQ5VU43 2346 aa18.9■□□□□ 0.62
SMPD3-208ENST00000566723 TNRC18O15417 2968 aaPredicted RBP18.89■□□□□ 0.61
SMPD3-208ENST00000566723 IPO8O15397 1037 aaKnown RBP18.89■□□□□ 0.61
SMPD3-208ENST00000566723 TRIM27P14373 513 aa18.89■□□□□ 0.61
SMPD3-208ENST00000566723 VGLL4Q14135 290 aa18.89■□□□□ 0.61
SMPD3-208ENST00000566723 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.89■□□□□ 0.61
SMPD3-208ENST00000566723 DOCK2Q92608 1830 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
SMPD3-208ENST00000566723 SEMA3EO15041 775 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 PRDX5P30044 214 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 PHKA1P46020 1223 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 MTX1Q13505 466 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 OTUD7BQ6GQQ9 843 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 DENND2AQ9ULE3 1009 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 HPS5Q9UPZ3 1129 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 DAGLAQ9Y4D2 1042 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 CSADQ9Y600 493 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 SALL1Q9NSC2 1324 aa18.88■□□□□ 0.61
SMPD3-208ENST00000566723 ZBTB22O15209 634 aa18.87■□□□□ 0.61
SMPD3-208ENST00000566723 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
SMPD3-208ENST00000566723 MAP3K9P80192 1104 aa18.87■□□□□ 0.61
SMPD3-208ENST00000566723 ATF7IPQ6VMQ6 1270 aa18.87■□□□□ 0.61
SMPD3-208ENST00000566723 HOOK2Q96ED9 719 aa18.87■□□□□ 0.61
SMPD3-208ENST00000566723 BCAR3O75815 825 aa18.86■□□□□ 0.61
SMPD3-208ENST00000566723 LDHBP07195 334 aaKnown RBP18.86■□□□□ 0.61
SMPD3-208ENST00000566723 ADORA1P30542 326 aa18.86■□□□□ 0.61
SMPD3-208ENST00000566723 SOX10P56693 466 aa18.86■□□□□ 0.61
SMPD3-208ENST00000566723 DIXDC1Q155Q3 683 aa18.86■□□□□ 0.61
SMPD3-208ENST00000566723 FBXO46Q6PJ61 603 aaPredicted RBP18.86■□□□□ 0.61
SMPD3-208ENST00000566723 CNKSR2Q8WXI2 1034 aa18.86■□□□□ 0.61
SMPD3-208ENST00000566723 CENPFP49454 3210 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms