RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 SDSP20132 328 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 RGS3P49796 1198 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 MECOMQ03112 1051 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 KBTBD3Q8NAB2 608 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 GPRC5DQ9NZD1 345 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 GAKO14976 1311 aa11.24□□□□□ -0.61
SMPD3-207ENST00000566466 ERC2O15083 957 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 FOXP2O15409 715 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 EPS15P42566 896 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 HIRAP54198 1017 aaPredicted RBP11.23□□□□□ -0.61
SMPD3-207ENST00000566466 EIF6P56537 245 aaKnown RBP11.23□□□□□ -0.61
SMPD3-207ENST00000566466 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 DPF2Q92785 391 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 SUGT1Q9Y2Z0 365 aa11.23□□□□□ -0.61
SMPD3-207ENST00000566466 F8W031 263 aaPredicted RBP11.22□□□□□ -0.61
SMPD3-207ENST00000566466 ASTN2O75129 1339 aaPredicted RBP11.22□□□□□ -0.61
SMPD3-207ENST00000566466 PDE6AP16499 860 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 RPS12P25398 132 aaKnown RBP11.22□□□□□ -0.61
SMPD3-207ENST00000566466 ADD2P35612 726 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 TNIP1Q15025 636 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 BMP2KLQ5H9B9 411 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 APOBEC3HQ6NTF7 200 aaKnown RBP11.22□□□□□ -0.61
SMPD3-207ENST00000566466 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 GPATCH3Q96I76 525 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 GJA3Q9Y6H8 435 aa11.22□□□□□ -0.61
SMPD3-207ENST00000566466 DDX60LQ5H9U9 1706 aaKnown RBP11.21□□□□□ -0.61
SMPD3-207ENST00000566466 G3V3G9 751 aa11.21□□□□□ -0.61
SMPD3-207ENST00000566466 RHBDL3P58872 404 aa11.21□□□□□ -0.61
SMPD3-207ENST00000566466 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
SMPD3-207ENST00000566466 MTMR14Q8NCE2 650 aa11.21□□□□□ -0.61
SMPD3-207ENST00000566466 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.61
SMPD3-207ENST00000566466 RIOK1Q9BRS2 568 aaKnown RBP11.21□□□□□ -0.61
SMPD3-207ENST00000566466 ABCF2Q9UG63 623 aa11.21□□□□□ -0.61
SMPD3-207ENST00000566466 TTF2Q9UNY4 1162 aaKnown RBP11.21□□□□□ -0.61
SMPD3-207ENST00000566466 MROH7-TTC4A0A0A0MT08 1334 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 ZNF532Q9HCE3 1301 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 FRAT2O75474 233 aaPredicted RBP11.2□□□□□ -0.62
SMPD3-207ENST00000566466 IDH1O75874 414 aaKnown RBP11.2□□□□□ -0.62
SMPD3-207ENST00000566466 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
SMPD3-207ENST00000566466 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 POTEJP0CG39 1038 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 CRKP46108 304 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 SAMD7Q7Z3H4 446 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 MAGEB6Q8N7X4 407 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 OSBP2Q969R2 916 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 EVI5LQ96CN4 794 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 SEC62Q99442 399 aaKnown RBP11.2□□□□□ -0.62
SMPD3-207ENST00000566466 MRIQ9BWK5 157 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
SMPD3-207ENST00000566466 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
SMPD3-207ENST00000566466 MYH7P12883 1935 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 SCN4AP35499 1836 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 MAST3O60307 1309 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 GPR75-ASB3A0A0A6YYF3 556 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 A0A0D9SFI3 127 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 M0R2C6 588 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 WNT10BO00744 389 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 TTF1Q15361 905 aaPredicted RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 UBE3CQ15386 1083 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 CFAP100Q494V2 611 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 ZMYM1Q5SVZ6 1142 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 HHIPL2Q6UWX4 724 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 PRMT6Q96LA8 375 aaPredicted RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 FAM227BQ96M60 508 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 ZDHHC15Q96MV8 337 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 PUS7LQ9H0K6 701 aaKnown RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 TAF1DQ9H5J8 278 aaPredicted RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 MYOZ2Q9NPC6 264 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 LRP2BPQ9P2M1 347 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 ZBTB47Q9UFB7 747 aaPredicted RBP11.19□□□□□ -0.62
SMPD3-207ENST00000566466 SERPINA10Q9UK55 444 aa11.19□□□□□ -0.62
SMPD3-207ENST00000566466 MYH2Q9UKX2 1941 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 IGSF3O75054 1194 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 CHMLP26374 656 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 DYNLL1P63167 89 aaKnown RBP11.18□□□□□ -0.62
SMPD3-207ENST00000566466 NBPF9Q3BBW0 867 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-207ENST00000566466 SLC9C2Q5TAH2 1124 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
SMPD3-207ENST00000566466 LCORLQ8N3X6 602 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 ZGPATQ8N5A5 531 aaKnown RBP11.18□□□□□ -0.62
SMPD3-207ENST00000566466 RAI14Q9P0K7 980 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 MKRN1Q9UHC7 482 aaKnown RBP11.18□□□□□ -0.62
SMPD3-207ENST00000566466 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
SMPD3-207ENST00000566466 CNTNAP1P78357 1384 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 SPDYE4A6NLX3 237 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 KIF3CO14782 793 aa11.17□□□□□ -0.62
SMPD3-207ENST00000566466 RNF113AO15541 343 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms