RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 NHSQ6T4R5 1651 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 CTAGE5O15320 804 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 CAVIN2O95810 425 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 HMGB2P26583 209 aaKnown RBP15.64■□□□□ 0.09
LINC00563-201ENST00000566370 RASGRF1Q13972 1273 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 TPRNQ4KMQ1 711 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 CCDC73Q6ZRK6 1079 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 BRAPQ7Z569 592 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 VPS37DQ86XT2 251 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 RNF214Q8ND24 703 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 C8orf76Q96K31 380 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 STRBPQ96SI9 672 aaKnown RBP15.64■□□□□ 0.09
LINC00563-201ENST00000566370 MTA3Q9BTC8 594 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 SEC31BQ9NQW1 1179 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 PNPLA7Q6ZV29 1317 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
LINC00563-201ENST00000566370 TCRBV5S4A2TA0A5A2 114 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 ERICH2A1L162 156 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 SEMA3EO15041 775 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 RPS6KA4O75676 772 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 MBD4O95243 580 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 KCNA4P22459 653 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
LINC00563-201ENST00000566370 NFXL1Q6ZNB6 911 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 ANKRD2Q9GZV1 360 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 BSDC1Q9NW68 430 aaPredicted RBP15.63■□□□□ 0.09
LINC00563-201ENST00000566370 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
LINC00563-201ENST00000566370 KCNQ2O43526 872 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 TDO2P48775 406 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 METAP2P50579 478 aaKnown RBP eCLIP15.62■□□□□ 0.09
LINC00563-201ENST00000566370 COL9A3Q14050 684 aaPredicted RBP15.62■□□□□ 0.09
LINC00563-201ENST00000566370 TRIM29Q14134 588 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 SLC10A5Q5PT55 438 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 SASS6Q6UVJ0 657 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 CHST3Q7LGC8 479 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 WASF1Q92558 559 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 NLRP3Q96P20 1036 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 RRAGDQ9NQL2 400 aaPredicted RBP15.62■□□□□ 0.09
LINC00563-201ENST00000566370 TFIP11Q9UBB9 837 aaKnown RBP15.62■□□□□ 0.09
LINC00563-201ENST00000566370 ORC3Q9UBD5 711 aaPredicted RBP15.62■□□□□ 0.09
LINC00563-201ENST00000566370 NARFQ9UHQ1 456 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 CHD4Q14839 1912 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 TIAM2Q8IVF5 1701 aa15.62■□□□□ 0.09
LINC00563-201ENST00000566370 CCDC69A6NI79 296 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 NPHP1O15259 732 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 FOXP2O15409 715 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 IGSF3O75054 1194 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 CTDNEP1O95476 244 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 MFSD6Q6ZSS7 791 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 IFNL3Q8IZI9 196 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 TMTC2Q8N394 836 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 FNBP4Q8N3X1 1017 aaPredicted RBP15.61■□□□□ 0.09
LINC00563-201ENST00000566370 CLSTN2Q9H4D0 955 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 NCOA5Q9HCD5 579 aaKnown RBP15.61■□□□□ 0.09
LINC00563-201ENST00000566370 USP21Q9UK80 565 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 RTCBQ9Y3I0 505 aaKnown RBP15.61■□□□□ 0.09
LINC00563-201ENST00000566370 BCL9LQ86UU0 1499 aa15.61■□□□□ 0.09
LINC00563-201ENST00000566370 SH2B2O14492 632 aaPredicted RBP15.6■□□□□ 0.09
LINC00563-201ENST00000566370 TPM3P06753 285 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 TPTE2Q6XPS3 522 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 NBPF5PQ86XG9 351 aaPredicted RBP15.6■□□□□ 0.09
LINC00563-201ENST00000566370 RCOR1Q9UKL0 485 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 SLC4A4Q9Y6R1 1079 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 BTAF1O14981 1849 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 GOLGA6L6A8MZA4 724 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 ZBTB43O43298 467 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 ANTXR2P58335 489 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 GNL2Q13823 731 aaKnown RBP15.6■□□□□ 0.09
LINC00563-201ENST00000566370 SF3A1Q15459 793 aaKnown RBP15.6■□□□□ 0.09
LINC00563-201ENST00000566370 TMEM67Q5HYA8 995 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 AKNAD1Q5T1N1 836 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 FAM173BQ6P4H8 233 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 GIMAP6Q6P9H5 292 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 DACT1Q9NYF0 836 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 RAI14Q9P0K7 980 aa15.6■□□□□ 0.09
LINC00563-201ENST00000566370 CCNL1Q9UK58 526 aaPredicted RBP15.6■□□□□ 0.09
LINC00563-201ENST00000566370 COL24A1Q17RW2 1714 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
LINC00563-201ENST00000566370 PDS5AQ29RF7 1337 aaKnown RBP15.59■□□□□ 0.09
LINC00563-201ENST00000566370 A0A1B0GUL6 1792 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 A0A0G2JLW4 131 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 CCDC196A0A1B0GTZ2 297 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 GOLGA8AA7E2F4 631 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 KINO60870 393 aaKnown RBP15.59■□□□□ 0.09
LINC00563-201ENST00000566370 CYP7A1P22680 504 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 LIFRP42702 1097 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 BCAMP50895 628 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 RCAN1P53805 252 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
LINC00563-201ENST00000566370 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 KCNG4Q8TDN1 519 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
LINC00563-201ENST00000566370 NOL7Q9UMY1 257 aaKnown RBP15.59■□□□□ 0.09
LINC00563-201ENST00000566370 ZNF804BA4D1E1 1349 aa15.58■□□□□ 0.09
LINC00563-201ENST00000566370 MAGEB6P1A0A0J9YX57 407 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms