RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 TRPM7Q96QT4 1865 aa22.24■■□□□ 1.15
TRADD-205ENST00000566247 LDHBP07195 334 aaKnown RBP22.24■■□□□ 1.15
TRADD-205ENST00000566247 UQCRFS1P1P0C7P4 283 aa22.24■■□□□ 1.15
TRADD-205ENST00000566247 HDLBPQ00341 1268 aaKnown RBP22.24■■□□□ 1.15
TRADD-205ENST00000566247 PAXIP1Q6ZW49 1069 aaPredicted RBP22.24■■□□□ 1.15
TRADD-205ENST00000566247 PDS5AQ29RF7 1337 aaKnown RBP22.24■■□□□ 1.15
TRADD-205ENST00000566247 SALL1Q9NSC2 1324 aa22.24■■□□□ 1.15
TRADD-205ENST00000566247 CNTNAP1P78357 1384 aa22.24■■□□□ 1.15
TRADD-205ENST00000566247 ZBTB22O15209 634 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 ARID4AP29374 1257 aaPredicted RBP22.23■■□□□ 1.15
TRADD-205ENST00000566247 DEFB115Q30KQ5 88 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 RHPN1Q8TCX5 695 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 CCDC8Q9H0W5 538 aaPredicted RBP22.23■■□□□ 1.15
TRADD-205ENST00000566247 ABCF2Q9UG63 623 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 TLL2Q9Y6L7 1015 aa22.23■■□□□ 1.15
TRADD-205ENST00000566247 PRDX5P30044 214 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 AACSQ86V21 672 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 C2orf69Q8N8R5 385 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 SPATA5Q8NB90 893 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 KIF1BPQ96EK5 621 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 BCL11AQ9H165 835 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 GBA2Q9HCG7 927 aaPredicted RBP22.22■■□□□ 1.15
TRADD-205ENST00000566247 IL1RAPL2Q9NP60 686 aa22.22■■□□□ 1.15
TRADD-205ENST00000566247 RAB11FIP3O75154 756 aa22.21■■□□□ 1.15
TRADD-205ENST00000566247 NF2P35240 595 aa22.21■■□□□ 1.15
TRADD-205ENST00000566247 SPTY2D1Q68D10 685 aaPredicted RBP22.21■■□□□ 1.15
TRADD-205ENST00000566247 EAF2Q96CJ1 260 aaPredicted RBP22.21■■□□□ 1.15
TRADD-205ENST00000566247 TDRD3Q9H7E2 651 aaKnown RBP22.21■■□□□ 1.15
TRADD-205ENST00000566247 HMG20BQ9P0W2 317 aa22.21■■□□□ 1.15
TRADD-205ENST00000566247 DBNLQ9UJU6 430 aaKnown RBP22.21■■□□□ 1.15
TRADD-205ENST00000566247 POLR2AP24928 1970 aaKnown RBP22.2■■□□□ 1.14
TRADD-205ENST00000566247 RASSF10A6NK89 507 aa22.2■■□□□ 1.14
TRADD-205ENST00000566247 PRAMEF18Q5VWM3 479 aa22.2■■□□□ 1.14
TRADD-205ENST00000566247 DZIP1Q86YF9 867 aaKnown RBP22.2■■□□□ 1.14
TRADD-205ENST00000566247 CLASRPQ8N2M8 674 aaKnown RBP22.2■■□□□ 1.14
TRADD-205ENST00000566247 ZDHHC15Q96MV8 337 aa22.2■■□□□ 1.14
TRADD-205ENST00000566247 MRIQ9BWK5 157 aa22.2■■□□□ 1.14
TRADD-205ENST00000566247 TLR7Q9NYK1 1049 aaKnown RBP22.2■■□□□ 1.14
TRADD-205ENST00000566247 ZNF70Q9UC06 446 aaPredicted RBP22.2■■□□□ 1.14
TRADD-205ENST00000566247 MCAMP43121 646 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 TNFAIP1Q13829 316 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 SPDYE2Q495Y8 402 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 HHIPL2Q6UWX4 724 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 PI16Q6UXB8 463 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 SAPCD2Q86UD0 394 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 DEFB129Q9H1M3 183 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 TMOD2Q9NZR1 351 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 AOX1Q06278 1338 aa22.19■■□□□ 1.14
TRADD-205ENST00000566247 HUNKP57058 714 aa22.18■■□□□ 1.14
TRADD-205ENST00000566247 GRM1Q13255 1194 aa22.18■■□□□ 1.14
TRADD-205ENST00000566247 DIXDC1Q155Q3 683 aa22.18■■□□□ 1.14
TRADD-205ENST00000566247 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
TRADD-205ENST00000566247 PPP2R3BQ9Y5P8 575 aa22.18■■□□□ 1.14
TRADD-205ENST00000566247 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 IFIT2P09913 472 aaKnown RBP22.17■■□□□ 1.14
TRADD-205ENST00000566247 ECE1P42892 770 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 VEGFBP49765 207 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 TTLL12Q14166 644 aaPredicted RBP22.17■■□□□ 1.14
TRADD-205ENST00000566247 SLF2Q8IX21 1173 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 SNRKQ9NRH2 765 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 ECM29Q5VYK3 1845 aa22.17■■□□□ 1.14
TRADD-205ENST00000566247 TCP10L2B9ZVM9 353 aa22.16■■□□□ 1.14
TRADD-205ENST00000566247 TNNI2P48788 182 aa22.16■■□□□ 1.14
TRADD-205ENST00000566247 ZNF512BQ96KM6 892 aaPredicted RBP22.16■■□□□ 1.14
TRADD-205ENST00000566247 DAGLAQ9Y4D2 1042 aa22.16■■□□□ 1.14
TRADD-205ENST00000566247 FKBP1BP68106 108 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 RASA3Q14644 834 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 CYP4F22Q6NT55 531 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 APOBEC3HQ6NTF7 200 aaKnown RBP22.15■■□□□ 1.14
TRADD-205ENST00000566247 TBC1D9Q6ZT07 1266 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 JMYQ8N9B5 988 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 HHIPL1Q96JK4 782 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 CAPNS2Q96L46 248 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 LRRCC1Q9C099 1032 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 RAI14Q9P0K7 980 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 LRP2BPQ9P2M1 347 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 SUPT16HQ9Y5B9 1047 aaKnown RBP22.15■■□□□ 1.14
TRADD-205ENST00000566247 PCDHB15Q9Y5E8 787 aa22.15■■□□□ 1.14
TRADD-205ENST00000566247 WDR33Q9C0J8 1336 aaKnown RBP22.14■■□□□ 1.14
TRADD-205ENST00000566247 CACNB3P54284 484 aa22.14■■□□□ 1.13
TRADD-205ENST00000566247 MECOMQ03112 1051 aa22.13■■□□□ 1.13
TRADD-205ENST00000566247 PRKG1Q13976 671 aa22.13■■□□□ 1.13
TRADD-205ENST00000566247 SUPT20HL1Q3ZLR7 823 aa22.13■■□□□ 1.13
TRADD-205ENST00000566247 PAPPA2Q9BXP8 1791 aa22.12■■□□□ 1.13
TRADD-205ENST00000566247 ZAP70P43403 619 aa22.12■■□□□ 1.13
TRADD-205ENST00000566247 GSTO1P78417 241 aa22.12■■□□□ 1.13
TRADD-205ENST00000566247 ARMC9Q7Z3E5 817 aa22.12■■□□□ 1.13
TRADD-205ENST00000566247 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
TRADD-205ENST00000566247 LDHCP07864 332 aa22.11■■□□□ 1.13
TRADD-205ENST00000566247 RGMBQ6NW40 437 aa22.11■■□□□ 1.13
TRADD-205ENST00000566247 MOB2Q70IA6 237 aa22.11■■□□□ 1.13
TRADD-205ENST00000566247 USP40Q9NVE5 1235 aa22.11■■□□□ 1.13
TRADD-205ENST00000566247 MROH7-TTC4A0A0A0MT08 1334 aa22.1■■□□□ 1.13
TRADD-205ENST00000566247 SMARCA5O60264 1052 aaPredicted RBP22.1■■□□□ 1.13
TRADD-205ENST00000566247 CYP2E1P05181 493 aaPredicted RBP22.1■■□□□ 1.13
TRADD-205ENST00000566247 ZNF157P51786 506 aaPredicted RBP22.1■■□□□ 1.13
TRADD-205ENST00000566247 AAMPQ13685 434 aa22.1■■□□□ 1.13
TRADD-205ENST00000566247 CDC42EP5Q6NZY7 148 aa22.1■■□□□ 1.13
TRADD-205ENST00000566247 TMEM39BQ9GZU3 492 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms