RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ROBO2Q9HCK4 1378 aa7.53□□□□□ -1.2
CNOT1-209ENST00000566240 TLDC2A0PJX2 215 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 B3GALT4O96024 378 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 PTPRAP18433 802 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 NME2P22392 152 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 ETFBP38117 255 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 RASSF7Q02833 373 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 ELMSAN1Q6PJG2 1045 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 ADAMTSL4Q6UY14 1074 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 VN1R5Q7Z5H4 357 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 CCDC84Q86UT8 332 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-209ENST00000566240 SLITRK4Q8IW52 837 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 CPLX3Q8WVH0 158 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 ADAM19Q9H013 955 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.21
CNOT1-209ENST00000566240 MIR1-1HGQ9H1L0 117 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 SOX13Q9UN79 622 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 CYP8B1Q9UNU6 501 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 ADAMTS8Q9UP79 889 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 TMA7Q9Y2S6 64 aaKnown RBP7.52□□□□□ -1.21
CNOT1-209ENST00000566240 PCDHB5Q9Y5E4 795 aa7.52□□□□□ -1.21
CNOT1-209ENST00000566240 GDF11O95390 407 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 F13A1P00488 732 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 HSP90B1P14625 803 aaKnown RBP7.51□□□□□ -1.21
CNOT1-209ENST00000566240 MX2P20592 715 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 ADH7P40394 386 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 SEZ6Q53EL9 994 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 RASIP1Q5U651 963 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 ZNF385CQ66K41 422 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-209ENST00000566240 BNC2Q6ZN30 1099 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-209ENST00000566240 GATAD2BQ8WXI9 593 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 JARID2Q92833 1246 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-209ENST00000566240 KLF15Q9UIH9 416 aa7.51□□□□□ -1.21
CNOT1-209ENST00000566240 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 TLR3O15455 904 aaKnown RBP7.5□□□□□ -1.21
CNOT1-209ENST00000566240 ARAFP10398 606 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 BMS1Q14692 1282 aaKnown RBP7.5□□□□□ -1.21
CNOT1-209ENST00000566240 LRRC14Q15048 493 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 ANKS3Q6ZW76 656 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 FBXO27Q8NI29 283 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 LRRC3Q9BY71 257 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 LACRTQ9GZZ8 138 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 NAGPAQ9UK23 515 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 TRIM33Q9UPN9 1127 aa7.5□□□□□ -1.21
CNOT1-209ENST00000566240 FAM221AA4D161 298 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-209ENST00000566240 ESRRAP11474 423 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-209ENST00000566240 ARNTP27540 789 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 ADH6P28332 368 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 NFE2L2Q16236 605 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 SULF2Q8IWU5 870 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 SVOPQ8N4V2 548 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 WHAMMQ8TF30 809 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 ANAPC16Q96DE5 110 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 LPIN3Q9BQK8 851 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 SRRTQ9BXP5 876 aaKnown RBP7.49□□□□□ -1.21
CNOT1-209ENST00000566240 SH2B1Q9NRF2 756 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-209ENST00000566240 FRRS1LQ9P0K9 344 aa7.49□□□□□ -1.21
CNOT1-209ENST00000566240 CDK11AQ9UQ88 783 aaPredicted RBP7.49□□□□□ -1.21
CNOT1-209ENST00000566240 K7ELQ4 463 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-209ENST00000566240 KLF4O43474 513 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 SERINC3Q13530 473 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 SEPT6Q14141 434 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 MPP2Q14168 576 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 CWF19L2Q2TBE0 894 aaKnown RBP7.48□□□□□ -1.21
CNOT1-209ENST00000566240 DIEXFQ68CQ4 756 aaKnown RBP7.48□□□□□ -1.21
CNOT1-209ENST00000566240 ZNF746Q6NUN9 644 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-209ENST00000566240 LLGL2Q6P1M3 1020 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 GRIN3AQ8TCU5 1115 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 DDX54Q8TDD1 881 aaKnown RBP7.48□□□□□ -1.21
CNOT1-209ENST00000566240 MDFIQ99750 246 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 EMILIN2Q9BXX0 1053 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 CBX8Q9HC52 389 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 TBX22Q9Y458 520 aa7.48□□□□□ -1.21
CNOT1-209ENST00000566240 CILPO75339 1184 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 CDC27P30260 824 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 MCM4P33991 863 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 CABP4P57796 275 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 RAB33AQ14088 237 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 IKBKEQ14164 716 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 GAS6Q14393 721 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 CCDC81Q6ZN84 652 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 TTC9Q92623 222 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 MKL1Q969V6 931 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 MRFAP1L1Q96HT8 127 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 SHDQ96IW2 340 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 TRIM55Q9BYV6 548 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 PRKAG3Q9UGI9 489 aa7.47□□□□□ -1.21
CNOT1-209ENST00000566240 NSFL1CQ9UNZ2 370 aaKnown RBP7.47□□□□□ -1.21
CNOT1-209ENST00000566240 ELOA3CA0A087WX78 387 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 ELOA3DA6NLF2 546 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 NEURL1BA8MQ27 555 aa7.46□□□□□ -1.22
CNOT1-209ENST00000566240 SOX1O00570 391 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
CNOT1-209ENST00000566240 SLURP2P0DP57 97 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms