RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 FAM155AB1AL88 458 aaPredicted RBP20.73■□□□□ 0.91
USB1-211ENST00000565662 CRKP46108 304 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 LBX1P52954 281 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 CHAF1AQ13111 956 aaPredicted RBP20.73■□□□□ 0.91
USB1-211ENST00000565662 MAP3K11Q16584 847 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 RASAL3Q86YV0 1011 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 DZIP1LQ8IYY4 767 aaKnown RBP20.73■□□□□ 0.91
USB1-211ENST00000565662 CHMP4BQ9H444 224 aaKnown RBP20.73■□□□□ 0.91
USB1-211ENST00000565662 VEZTQ9HBM0 779 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 SALL1Q9NSC2 1324 aa20.73■□□□□ 0.91
USB1-211ENST00000565662 IREB2P48200 963 aaKnown RBP20.72■□□□□ 0.91
USB1-211ENST00000565662 BCAMP50895 628 aa20.72■□□□□ 0.91
USB1-211ENST00000565662 SREBF2Q12772 1141 aa20.72■□□□□ 0.91
USB1-211ENST00000565662 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
USB1-211ENST00000565662 FKBP1CQ5VVH2 108 aa20.72■□□□□ 0.91
USB1-211ENST00000565662 HHIPL2Q6UWX4 724 aa20.72■□□□□ 0.91
USB1-211ENST00000565662 SLF2Q8IX21 1173 aa20.71■□□□□ 0.91
USB1-211ENST00000565662 PRMT6Q96LA8 375 aaPredicted RBP20.71■□□□□ 0.91
USB1-211ENST00000565662 ZDHHC15Q96MV8 337 aa20.71■□□□□ 0.91
USB1-211ENST00000565662 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
USB1-211ENST00000565662 JAG2Q9Y219 1238 aa20.7■□□□□ 0.9
USB1-211ENST00000565662 RPAP1Q9BWH6 1393 aaPredicted RBP20.7■□□□□ 0.9
USB1-211ENST00000565662 LAMB1P07942 1786 aa20.69■□□□□ 0.9
USB1-211ENST00000565662 IGSF3O75054 1194 aa20.69■□□□□ 0.9
USB1-211ENST00000565662 ZBTB48P10074 688 aaPredicted RBP20.69■□□□□ 0.9
USB1-211ENST00000565662 INHBEP58166 350 aa20.69■□□□□ 0.9
USB1-211ENST00000565662 KIF23Q02241 960 aaPredicted RBP20.69■□□□□ 0.9
USB1-211ENST00000565662 G3BP1Q13283 466 aaKnown RBP eCLIP20.69■□□□□ 0.9
USB1-211ENST00000565662 DLK2Q6UY11 383 aa20.69■□□□□ 0.9
USB1-211ENST00000565662 TMEM57Q8N5G2 664 aa20.69■□□□□ 0.9
USB1-211ENST00000565662 ZNF70Q9UC06 446 aaPredicted RBP20.69■□□□□ 0.9
USB1-211ENST00000565662 CLRN2A0PK11 232 aa20.68■□□□□ 0.9
USB1-211ENST00000565662 RASA3Q14644 834 aa20.68■□□□□ 0.9
USB1-211ENST00000565662 SPTY2D1Q68D10 685 aaPredicted RBP20.68■□□□□ 0.9
USB1-211ENST00000565662 FAM83AQ86UY5 434 aa20.68■□□□□ 0.9
USB1-211ENST00000565662 ITPRIPQ8IWB1 547 aa20.68■□□□□ 0.9
USB1-211ENST00000565662 ANGEL1Q9UNK9 670 aaKnown RBP20.68■□□□□ 0.9
USB1-211ENST00000565662 IQSEC3Q9UPP2 1182 aaPredicted RBP20.68■□□□□ 0.9
USB1-211ENST00000565662 ALDH1A1P00352 501 aa20.67■□□□□ 0.9
USB1-211ENST00000565662 LDHBP07195 334 aaKnown RBP20.67■□□□□ 0.9
USB1-211ENST00000565662 LDLRAD1Q5T700 205 aa20.67■□□□□ 0.9
USB1-211ENST00000565662 PA2G4Q9UQ80 394 aaKnown RBP20.67■□□□□ 0.9
USB1-211ENST00000565662 UBE2Q2LH0YL09 131 aa20.66■□□□□ 0.9
USB1-211ENST00000565662 ANKRD13AQ8IZ07 590 aa20.66■□□□□ 0.9
USB1-211ENST00000565662 GPR108Q9NPR9 543 aa20.66■□□□□ 0.9
USB1-211ENST00000565662 A0A1B0GUL7 405 aa20.65■□□□□ 0.9
USB1-211ENST00000565662 MANSC4A6NHS7 340 aaPredicted RBP20.65■□□□□ 0.9
USB1-211ENST00000565662 CCDC102BQ68D86 513 aa20.65■□□□□ 0.9
USB1-211ENST00000565662 TDRD3Q9H7E2 651 aaKnown RBP20.65■□□□□ 0.9
USB1-211ENST00000565662 NOM1Q5C9Z4 860 aaKnown RBP20.64■□□□□ 0.89
USB1-211ENST00000565662 GORABQ5T7V8 394 aa20.64■□□□□ 0.89
USB1-211ENST00000565662 PRAMEF18Q5VWM3 479 aa20.64■□□□□ 0.89
USB1-211ENST00000565662 SSH3Q8TE77 659 aa20.64■□□□□ 0.89
USB1-211ENST00000565662 SLC10A4Q96EP9 437 aa20.64■□□□□ 0.89
USB1-211ENST00000565662 CSRNP1Q96S65 589 aa20.64■□□□□ 0.89
USB1-211ENST00000565662 SSC5DA1L4H1 1573 aa20.63■□□□□ 0.89
USB1-211ENST00000565662 UQCRFS1P1P0C7P4 283 aa20.63■□□□□ 0.89
USB1-211ENST00000565662 TM4SF4P48230 202 aa20.63■□□□□ 0.89
USB1-211ENST00000565662 DCAF15Q66K64 600 aa20.63■□□□□ 0.89
USB1-211ENST00000565662 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.63■□□□□ 0.89
USB1-211ENST00000565662 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
USB1-211ENST00000565662 PHKA1P46020 1223 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 ATP8B2P98198 1209 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 TFCP2Q12800 502 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 OS9Q13438 667 aaPredicted RBP20.62■□□□□ 0.89
USB1-211ENST00000565662 POLA2Q14181 598 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 HSP90AB4PQ58FF6 505 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 OTUD7BQ6GQQ9 843 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 XAGE2Q96GT9 111 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 CFHR5Q9BXR6 569 aa20.62■□□□□ 0.89
USB1-211ENST00000565662 SCAF8Q9UPN6 1271 aaKnown RBP20.62■□□□□ 0.89
USB1-211ENST00000565662 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
USB1-211ENST00000565662 SPRYD7Q5W111 196 aa20.61■□□□□ 0.89
USB1-211ENST00000565662 DZIP1Q86YF9 867 aaKnown RBP20.61■□□□□ 0.89
USB1-211ENST00000565662 ERC1Q8IUD2 1116 aa20.61■□□□□ 0.89
USB1-211ENST00000565662 RNF186Q9NXI6 227 aa20.61■□□□□ 0.89
USB1-211ENST00000565662 DDX19BQ9UMR2 479 aa20.61■□□□□ 0.89
USB1-211ENST00000565662 CSADQ9Y600 493 aa20.61■□□□□ 0.89
USB1-211ENST00000565662 PNMA6EA0A0J9YXQ4 647 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 TCP10L2B9ZVM9 353 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 ZBTB7BO15156 539 aaPredicted RBP20.6■□□□□ 0.89
USB1-211ENST00000565662 GSTO1P78417 241 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 APOBEC3HQ6NTF7 200 aaKnown RBP20.6■□□□□ 0.89
USB1-211ENST00000565662 MOB2Q70IA6 237 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 NEUROD6Q96NK8 337 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 PCDHAC2Q9Y5I4 1007 aa20.6■□□□□ 0.89
USB1-211ENST00000565662 OTOFQ9HC10 1997 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 MYH2Q9UKX2 1941 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 TRPA1O75762 1119 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 ARID4AP29374 1257 aaPredicted RBP20.59■□□□□ 0.89
USB1-211ENST00000565662 PRDX5P30044 214 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 RASGRF1Q13972 1273 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 PRKG1Q13976 671 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 CCDC158Q5M9N0 1113 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 NOP58Q9Y2X3 529 aaKnown RBP20.59■□□□□ 0.89
USB1-211ENST00000565662 DAGLAQ9Y4D2 1042 aa20.59■□□□□ 0.89
USB1-211ENST00000565662 HMMRO75330 724 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 LDHCP07864 332 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 TIMM10P62072 90 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 TMED8Q6PL24 325 aaPredicted RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms