RNA–Protein interactions for RNA: ENST00000565473.1

AP003096.1-202, humanhuman

TSL 3

Gene AP003096.1, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003096.1-202ENST00000565473 IGF2BP3O00425 579 aaKnown RBP eCLIP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 PPP1R12BO60237 982 aaPredicted RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 FKTNO75072 461 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 ZBTB48P10074 688 aaPredicted RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 HIBADHP31937 336 aaKnown RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 GJA5P36382 358 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 UBE4AQ14139 1066 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 RASA3Q14644 834 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 GRIK5Q16478 980 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 PKN2Q16513 984 aaKnown RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 RABL6Q3YEC7 729 aaPredicted RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 IFNL1Q8IU54 200 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 SLC10A4Q96EP9 437 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 IQSEC3Q9UPP2 1182 aaPredicted RBP12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
AP003096.1-202ENST00000565473 MANSC4A6NHS7 340 aaPredicted RBP12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 SUPT20HL1Q3ZLR7 823 aa12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 TDRD3Q9H7E2 651 aaKnown RBP12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 MROH5Q6ZUA9 1318 aa12.87□□□□□ -0.35
AP003096.1-202ENST00000565473 HTTP42858 3142 aa12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 USP2O75604 605 aaPredicted RBP12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 ALDH1A1P00352 501 aa12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 DZIP1LQ8IYY4 767 aaKnown RBP12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 KLHDC4Q8TBB5 520 aa12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
AP003096.1-202ENST00000565473 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 CRKP46108 304 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 CHAF1AQ13111 956 aaPredicted RBP12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 TNFAIP1Q13829 316 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 ANKRD13AQ8IZ07 590 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 SSH1Q8WYL5 1049 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 TMEM39BQ9GZU3 492 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 PTPRCP08575 1304 aa12.85□□□□□ -0.35
AP003096.1-202ENST00000565473 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 CACNB3P54284 484 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 INHBEP58166 350 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 VPS37DQ86XT2 251 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 OPTNQ96CV9 577 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 PTPN18Q99952 460 aa12.84□□□□□ -0.35
AP003096.1-202ENST00000565473 PDE8BO95263 885 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 BCAMP50895 628 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 CRHR2Q13324 411 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 VGLL4Q14135 290 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 OTOP1Q7RTM1 612 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 TRIM17Q9Y577 477 aa12.83□□□□□ -0.36
AP003096.1-202ENST00000565473 E9PSI1 815 aa12.82□□□□□ -0.36
AP003096.1-202ENST00000565473 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
AP003096.1-202ENST00000565473 CAP1Q01518 475 aa12.82□□□□□ -0.36
AP003096.1-202ENST00000565473 CAVIN4Q5BKX8 364 aa12.82□□□□□ -0.36
AP003096.1-202ENST00000565473 CD99L2Q8TCZ2 262 aa12.82□□□□□ -0.36
AP003096.1-202ENST00000565473 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 FGFR2P21802 821 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 TNNI2P48788 182 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 PUM3Q15397 648 aaKnown RBP12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 HABP4Q5JVS0 413 aaKnown RBP12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 TBC1D22AQ8WUA7 517 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 BRCA2P51587 3418 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 CENPFP49454 3210 aa12.81□□□□□ -0.36
AP003096.1-202ENST00000565473 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 BRI3BPQ8WY22 251 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
AP003096.1-202ENST00000565473 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
AP003096.1-202ENST00000565473 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
AP003096.1-202ENST00000565473 APOBEC3HQ6NTF7 200 aaKnown RBP12.79□□□□□ -0.36
AP003096.1-202ENST00000565473 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
AP003096.1-202ENST00000565473 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
AP003096.1-202ENST00000565473 CCL15-CCL14A0A0B4J2E2 113 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 EYA2O00167 538 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 CCL15Q16663 113 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 ATG9AQ7Z3C6 839 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 FAM43AQ8N2R8 423 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 WRNIP1Q96S55 665 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
AP003096.1-202ENST00000565473 CSADQ9Y600 493 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms