RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 TESPA1A2RU30 521 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-213ENST00000565173 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.68
CAPN3-213ENST00000565173 FKTNO75072 461 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 ALDH1A1P00352 501 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 FGFR2P21802 821 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 CRKP46108 304 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 RFX5P48382 616 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-213ENST00000565173 BCAMP50895 628 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 METTL24Q5JXM2 366 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 CDCA7LQ96GN5 454 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 PTPN18Q99952 460 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 IQSEC3Q9UPP2 1182 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-213ENST00000565173 LAMB1P07942 1786 aa10.8□□□□□ -0.68
CAPN3-213ENST00000565173 IREB2P48200 963 aaKnown RBP10.79□□□□□ -0.68
CAPN3-213ENST00000565173 HDLBPQ00341 1268 aaKnown RBP10.79□□□□□ -0.68
CAPN3-213ENST00000565173 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-213ENST00000565173 ANKRD13AQ8IZ07 590 aa10.79□□□□□ -0.68
CAPN3-213ENST00000565173 MRIQ9BWK5 157 aa10.79□□□□□ -0.68
CAPN3-213ENST00000565173 TMEM39BQ9GZU3 492 aa10.79□□□□□ -0.68
CAPN3-213ENST00000565173 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-213ENST00000565173 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 TCP10L2B9ZVM9 353 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-213ENST00000565173 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 ALDH1L2Q3SY69 923 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 CAVIN4Q5BKX8 364 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 APOBEC3HQ6NTF7 200 aaKnown RBP10.78□□□□□ -0.68
CAPN3-213ENST00000565173 FBXO46Q6PJ61 603 aaPredicted RBP10.78□□□□□ -0.68
CAPN3-213ENST00000565173 VPS37DQ86XT2 251 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 TBC1D22AQ8WUA7 517 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 MS4A4AQ96JQ5 239 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 KIF16BQ96L93 1317 aa10.78□□□□□ -0.68
CAPN3-213ENST00000565173 SLC34A2O95436 690 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 CAP1Q01518 475 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 PUM3Q15397 648 aaKnown RBP10.77□□□□□ -0.69
CAPN3-213ENST00000565173 ATG9AQ7Z3C6 839 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.77□□□□□ -0.69
CAPN3-213ENST00000565173 CNKSR2Q8WXI2 1034 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 OPTNQ96CV9 577 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 ZDHHC15Q96MV8 337 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 ELP3Q9H9T3 547 aa10.77□□□□□ -0.69
CAPN3-213ENST00000565173 OTOFQ9HC10 1997 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 EYA2O00167 538 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 FRAT2O75474 233 aaPredicted RBP10.76□□□□□ -0.69
CAPN3-213ENST00000565173 IFIT1P09914 478 aaKnown RBP10.76□□□□□ -0.69
CAPN3-213ENST00000565173 CACNB3P54284 484 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 MAP3K9P80192 1104 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 CRHR2Q13324 411 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 VGLL4Q14135 290 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 OTOP1Q7RTM1 612 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 TEKT1Q969V4 418 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 SUGT1Q9Y2Z0 365 aa10.76□□□□□ -0.69
CAPN3-213ENST00000565173 TNNI2P48788 182 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 FKBP1CQ5VVH2 108 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 HHIPL2Q6UWX4 724 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 FAM83AQ86UY5 434 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 LPIN2Q92539 896 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 SMC4Q9NTJ3 1288 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 NOB1Q9ULX3 412 aaKnown RBP10.75□□□□□ -0.69
CAPN3-213ENST00000565173 TRIM17Q9Y577 477 aa10.75□□□□□ -0.69
CAPN3-213ENST00000565173 OTUD7BQ6GQQ9 843 aa10.74□□□□□ -0.69
CAPN3-213ENST00000565173 BRI3BPQ8WY22 251 aa10.74□□□□□ -0.69
CAPN3-213ENST00000565173 PDE4DIPQ5VU43 2346 aa10.74□□□□□ -0.69
CAPN3-213ENST00000565173 CIAO1O76071 339 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
CAPN3-213ENST00000565173 SLC5A1P13866 664 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 GTF2A2P52657 109 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 SP3Q02447 781 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 FAM43AQ8N2R8 423 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 WDR66Q8TBY9 1149 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 CD99L2Q8TCZ2 262 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 SNCAIPQ9Y6H5 919 aa10.73□□□□□ -0.69
CAPN3-213ENST00000565173 CCL15-CCL14A0A0B4J2E2 113 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 SPDYE5A6NIY4 337 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 UBTFL1P0CB47 393 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-213ENST00000565173 CCL15Q16663 113 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-213ENST00000565173 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 ERO1AQ96HE7 468 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 SIL1Q9H173 461 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 DAGLAQ9Y4D2 1042 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 CSADQ9Y600 493 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 LRRFIP2Q9Y608 721 aaKnown RBP10.72□□□□□ -0.69
CAPN3-213ENST00000565173 MAST3O60307 1309 aa10.72□□□□□ -0.69
CAPN3-213ENST00000565173 POTEFA5A3E0 1075 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 IRF6O14896 467 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 ZBTB22O15209 634 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 PRDX5P30044 214 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 RARSP54136 660 aaKnown RBP10.71□□□□□ -0.69
CAPN3-213ENST00000565173 DIXDC1Q155Q3 683 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 ATP2B3Q16720 1220 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 MIGA2Q7L4E1 593 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 ERO1BQ86YB8 467 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 FAM151AQ8WW52 585 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 MEIS3Q99687 375 aa10.71□□□□□ -0.69
CAPN3-213ENST00000565173 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms