RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 FAM168AQ92567 244 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 ZKSCAN3Q9BRR0 538 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
CHD9-214ENST00000565119 ESRRAP11474 423 aaPredicted RBP8.97□□□□□ -0.97
CHD9-214ENST00000565119 RAB6AP20340 208 aa8.97□□□□□ -0.97
CHD9-214ENST00000565119 BNIP3Q12983 259 aa8.97□□□□□ -0.97
CHD9-214ENST00000565119 LCE5AQ5TCM9 118 aa8.97□□□□□ -0.97
CHD9-214ENST00000565119 NRSN2Q9GZP1 204 aa8.97□□□□□ -0.97
CHD9-214ENST00000565119 GSTM4Q03013 218 aa8.96□□□□□ -0.98
CHD9-214ENST00000565119 MAP7Q14244 749 aa8.96□□□□□ -0.98
CHD9-214ENST00000565119 A6NHS1 94 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 ZNF865P0CJ78 1059 aaPredicted RBP8.95□□□□□ -0.98
CHD9-214ENST00000565119 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 TMEM40Q8WWA1 233 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 GGNBP2Q9H3C7 697 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 ACSS3Q9H6R3 686 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 C1GALT1Q9NS00 363 aa8.95□□□□□ -0.98
CHD9-214ENST00000565119 SEZ6L2Q6UXD5 910 aa8.94□□□□□ -0.98
CHD9-214ENST00000565119 RC3H2Q9HBD1 1191 aaKnown RBP8.94□□□□□ -0.98
CHD9-214ENST00000565119 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
CHD9-214ENST00000565119 FAM105AQ9NUU6 356 aa8.94□□□□□ -0.98
CHD9-214ENST00000565119 ADAMTS6Q9UKP5 1117 aa8.94□□□□□ -0.98
CHD9-214ENST00000565119 DYNC1LI2O43237 492 aaPredicted RBP8.93□□□□□ -0.98
CHD9-214ENST00000565119 RNASE1P07998 156 aaKnown RBP8.93□□□□□ -0.98
CHD9-214ENST00000565119 FUT4P22083 530 aa8.93□□□□□ -0.98
CHD9-214ENST00000565119 CILP2Q8IUL8 1156 aa8.93□□□□□ -0.98
CHD9-214ENST00000565119 ASAP3Q8TDY4 903 aa8.93□□□□□ -0.98
CHD9-214ENST00000565119 RPLP1P05386 114 aaKnown RBP8.92□□□□□ -0.98
CHD9-214ENST00000565119 CTSBP07858 339 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 MESP2Q0VG99 397 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 KRTAP19-4Q3LI73 84 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 OGFOD3Q6PK18 319 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 EDEM1Q92611 657 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 PMEPA1Q969W9 287 aa8.92□□□□□ -0.98
CHD9-214ENST00000565119 BHLHE41Q9C0J9 482 aaPredicted RBP8.92□□□□□ -0.98
CHD9-214ENST00000565119 CD8BP10966 210 aa8.91□□□□□ -0.98
CHD9-214ENST00000565119 DYMQ7RTS9 669 aa8.91□□□□□ -0.98
CHD9-214ENST00000565119 SLC38A3Q99624 504 aa8.91□□□□□ -0.98
CHD9-214ENST00000565119 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.9□□□□□ -0.98
CHD9-214ENST00000565119 EREGO14944 169 aa8.9□□□□□ -0.98
CHD9-214ENST00000565119 DNM1Q05193 864 aaKnown RBP8.9□□□□□ -0.98
CHD9-214ENST00000565119 ELOAQ14241 798 aaKnown RBP8.9□□□□□ -0.98
CHD9-214ENST00000565119 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
CHD9-214ENST00000565119 MAOBP27338 520 aa8.89□□□□□ -0.99
CHD9-214ENST00000565119 AKAP4Q5JQC9 854 aa8.89□□□□□ -0.99
CHD9-214ENST00000565119 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
CHD9-214ENST00000565119 PDGFAP04085 211 aa8.88□□□□□ -0.99
CHD9-214ENST00000565119 C8orf34Q49A92 452 aa8.88□□□□□ -0.99
CHD9-214ENST00000565119 PLD6Q8N2A8 252 aaKnown RBP8.88□□□□□ -0.99
CHD9-214ENST00000565119 GSX1Q9H4S2 264 aaPredicted RBP8.88□□□□□ -0.99
CHD9-214ENST00000565119 LGR6Q9HBX8 967 aa8.88□□□□□ -0.99
CHD9-214ENST00000565119 SEPT3Q9UH03 358 aa8.88□□□□□ -0.99
CHD9-214ENST00000565119 METTL12A8MUP2 240 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 CD96P40200 585 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 ASPAP45381 313 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 FAM84AQ96KN4 292 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 LATS2Q9NRM7 1088 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 DAGLAQ9Y4D2 1042 aa8.87□□□□□ -0.99
CHD9-214ENST00000565119 EDN3P14138 238 aa8.86□□□□□ -0.99
CHD9-214ENST00000565119 PEAR1Q5VY43 1037 aaPredicted RBP8.86□□□□□ -0.99
CHD9-214ENST00000565119 FAM181AQ8N9Y4 354 aa8.86□□□□□ -0.99
CHD9-214ENST00000565119 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.86□□□□□ -0.99
CHD9-214ENST00000565119 PCSK2P16519 638 aa8.85□□□□□ -0.99
CHD9-214ENST00000565119 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
CHD9-214ENST00000565119 PI4K2BQ8TCG2 481 aa8.85□□□□□ -0.99
CHD9-214ENST00000565119 NETO1Q8TDF5 533 aa8.85□□□□□ -0.99
CHD9-214ENST00000565119 AP4E1Q9UPM8 1137 aa8.85□□□□□ -0.99
CHD9-214ENST00000565119 U3KQE9 123 aa8.85□□□□□ -0.99
CHD9-214ENST00000565119 EIF4EBP3O60516 100 aaPredicted RBP8.84□□□□□ -0.99
CHD9-214ENST00000565119 CFPP27918 469 aa8.84□□□□□ -0.99
CHD9-214ENST00000565119 ZNF423Q2M1K9 1284 aa8.84□□□□□ -0.99
CHD9-214ENST00000565119 CYP27C1Q4G0S4 372 aa8.84□□□□□ -0.99
CHD9-214ENST00000565119 LILRA6Q6PI73 481 aa8.84□□□□□ -0.99
CHD9-214ENST00000565119 LRRC10BA6NIK2 292 aa8.83□□□□□ -1
CHD9-214ENST00000565119 PHACTR2O75167 634 aa8.83□□□□□ -1
CHD9-214ENST00000565119 TNFRSF21O75509 655 aa8.83□□□□□ -1
CHD9-214ENST00000565119 ECEL1O95672 775 aa8.83□□□□□ -1
CHD9-214ENST00000565119 POU4F3Q15319 338 aa8.83□□□□□ -1
CHD9-214ENST00000565119 TMEM164Q5U3C3 297 aa8.83□□□□□ -1
CHD9-214ENST00000565119 LCNL1Q6ZST4 164 aa8.83□□□□□ -1
CHD9-214ENST00000565119 C1QL4Q86Z23 238 aa8.83□□□□□ -1
CHD9-214ENST00000565119 TTC16Q8NEE8 873 aa8.83□□□□□ -1
CHD9-214ENST00000565119 RAD18Q9NS91 495 aa8.83□□□□□ -1
CHD9-214ENST00000565119 SLAIN2Q9P270 581 aa8.83□□□□□ -1
CHD9-214ENST00000565119 VAV3Q9UKW4 847 aa8.83□□□□□ -1
CHD9-214ENST00000565119 NCANO14594 1321 aa8.82□□□□□ -1
CHD9-214ENST00000565119 CYP11A1P05108 521 aa8.82□□□□□ -1
CHD9-214ENST00000565119 MZF1P28698 734 aaPredicted RBP8.82□□□□□ -1
CHD9-214ENST00000565119 PCDH1Q08174 1060 aa8.82□□□□□ -1
CHD9-214ENST00000565119 CLP1Q92989 425 aaKnown RBP8.82□□□□□ -1
CHD9-214ENST00000565119 PRRG2O14669 202 aa8.81□□□□□ -1
CHD9-214ENST00000565119 PRKCQQ04759 706 aa8.81□□□□□ -1
CHD9-214ENST00000565119 FOXD3Q9UJU5 478 aaPredicted RBP8.81□□□□□ -1
CHD9-214ENST00000565119 FAM87AP0C7U9 286 aa8.8□□□□□ -1
CHD9-214ENST00000565119 CDK5R2Q13319 367 aa8.8□□□□□ -1
CHD9-214ENST00000565119 NOM1Q5C9Z4 860 aaKnown RBP8.8□□□□□ -1
CHD9-214ENST00000565119 HP1BP3Q5SSJ5 553 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms