RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 KLHDC4Q8TBB5 520 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 DCPSQ96C86 337 aaKnown RBP11.86□□□□□ -0.51
UBFD1-203ENST00000564106 HHIPL1Q96JK4 782 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 MPHOSPH8Q99549 860 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 COA1Q9GZY4 146 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 LEMD3Q9Y2U8 911 aa11.86□□□□□ -0.51
UBFD1-203ENST00000564106 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 CIAO1O76071 339 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 GSPT1P15170 499 aaKnown RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 MAP2K2P36507 400 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 IL15P40933 162 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 RFX5P48382 616 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 IFIT5Q13325 482 aaKnown RBP11.85□□□□□ -0.51
UBFD1-203ENST00000564106 STRIP1Q5VSL9 837 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 RGMBQ6NW40 437 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 RASAL3Q86YV0 1011 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 IL1RAPL2Q9NP60 686 aa11.85□□□□□ -0.51
UBFD1-203ENST00000564106 SLC10A3P09131 477 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-203ENST00000564106 LRRC24Q50LG9 513 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 TTLL5Q6EMB2 1281 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 ANKRD2Q9GZV1 360 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 ECHDC1Q9NTX5 307 aa11.84□□□□□ -0.51
UBFD1-203ENST00000564106 PA2G4Q9UQ80 394 aaKnown RBP11.84□□□□□ -0.51
UBFD1-203ENST00000564106 OTOFQ9HC10 1997 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 F8W031 263 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-203ENST00000564106 UBE2Q2LH0YL09 131 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 SDSP20132 328 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 GYG1P46976 350 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
UBFD1-203ENST00000564106 AACSQ86V21 672 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 CDAN1Q8IWY9 1227 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 OTUD7AQ8TE49 926 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-203ENST00000564106 SIL1Q9H173 461 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 PITPNM2Q9BZ72 1349 aa11.83□□□□□ -0.52
UBFD1-203ENST00000564106 EYA2O00167 538 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 REC8O95072 547 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 IL1R1P14778 569 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 KCNJ4P48050 445 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 ZNF157P51786 506 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-203ENST00000564106 LDHAL6AQ6ZMR3 332 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 VGLL2Q8N8G2 317 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 ABHD8Q96I13 439 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 RIPOR2Q9Y4F9 1068 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 COL1A1P02452 1464 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-203ENST00000564106 AKAP11Q9UKA4 1901 aa11.82□□□□□ -0.52
UBFD1-203ENST00000564106 CLRN2A0PK11 232 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 PRKG1Q13976 671 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 C2orf69Q8N8R5 385 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 PI4K2BQ8TCG2 481 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 FAM84BQ96KN1 310 aaPredicted RBP11.81□□□□□ -0.52
UBFD1-203ENST00000564106 TBC1D32Q96NH3 1257 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 CSRNP1Q96S65 589 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 CNNM1Q9NRU3 951 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
UBFD1-203ENST00000564106 AKAP2Q9Y2D5 859 aa11.81□□□□□ -0.52
UBFD1-203ENST00000564106 HIP1O00291 1037 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 MFAP1P55081 439 aaKnown RBP11.8□□□□□ -0.52
UBFD1-203ENST00000564106 MKRN3Q13064 507 aaKnown RBP11.8□□□□□ -0.52
UBFD1-203ENST00000564106 NOGQ13253 232 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 TICAM2Q86XR7 235 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 PRMT6Q96LA8 375 aaPredicted RBP11.8□□□□□ -0.52
UBFD1-203ENST00000564106 IPO9Q96P70 1041 aaKnown RBP11.8□□□□□ -0.52
UBFD1-203ENST00000564106 RNF186Q9NXI6 227 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 CEP126Q9P2H0 1117 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 FPGT-TNNI3KV9GXZ4 949 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 MYO3BQ8WXR4 1341 aa11.8□□□□□ -0.52
UBFD1-203ENST00000564106 LAMB1P07942 1786 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 EPB41L2O43491 1005 aaKnown RBP11.79□□□□□ -0.52
UBFD1-203ENST00000564106 TFCP2Q12800 502 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 CFAP100Q494V2 611 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 ATG9AQ7Z3C6 839 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 TDRD7Q8NHU6 1098 aaKnown RBP11.79□□□□□ -0.52
UBFD1-203ENST00000564106 RILPL2Q969X0 211 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
UBFD1-203ENST00000564106 C22orf23Q9BZE7 217 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 MCOLN1Q9GZU1 580 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 R3HDMLQ9H3Y0 253 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 RFX7Q2KHR2 1363 aa11.79□□□□□ -0.52
UBFD1-203ENST00000564106 SPDYE2BA6NHP3 402 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 TRPA1O75762 1119 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 SEC24BO95487 1268 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 SPDYE6P0CI01 402 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 RBM25P49756 843 aaKnown RBP11.78□□□□□ -0.52
UBFD1-203ENST00000564106 EVI5LQ96CN4 794 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 CLMNQ96JQ2 1002 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 DAXXQ9UER7 740 aaPredicted RBP11.78□□□□□ -0.52
UBFD1-203ENST00000564106 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.78□□□□□ -0.52
UBFD1-203ENST00000564106 FAM205AQ6ZU69 1335 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 MYH13Q9UKX3 1938 aa11.78□□□□□ -0.52
UBFD1-203ENST00000564106 ATP5JP18859 108 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms