RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 LDLRAD1Q5T700 205 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 PRAMEF18Q5VWM3 479 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 TEKT1Q969V4 418 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 ZDHHC15Q96MV8 337 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 SAGE1Q9NXZ1 904 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 SCAF8Q9UPN6 1271 aaKnown RBP15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 IQSEC3Q9UPP2 1182 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 SALL1Q9NSC2 1324 aa15.16■□□□□ 0.02
NSMCE1-204ENST00000563273 MS4A1P11836 297 aa15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 FKBP1CQ5VVH2 108 aa15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 HHIPL2Q6UWX4 724 aa15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 ZNF70Q9UC06 446 aaPredicted RBP15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 AOX1Q06278 1338 aa15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 POLR2AP24928 1970 aaKnown RBP15.15■□□□□ 0.02
NSMCE1-204ENST00000563273 ARAP2Q8WZ64 1704 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 CLRN2A0PK11 232 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 UBE2Q2LH0YL09 131 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 ZBTB7BO15156 539 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 PPP1R12BO60237 982 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 POLA2Q14181 598 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 RASA3Q14644 834 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 GRIK5Q16478 980 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 ZIC5Q96T25 663 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 VEZTQ9HBM0 779 aa15.14■□□□□ 0.01
NSMCE1-204ENST00000563273 PNMA6EA0A0J9YXQ4 647 aa15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 RLBP1P12271 317 aa15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 PHKA1P46020 1223 aa15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 TTLL12Q14166 644 aaPredicted RBP15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 SSH3Q8TE77 659 aa15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 TDRD3Q9H7E2 651 aaKnown RBP15.13■□□□□ 0.01
NSMCE1-204ENST00000563273 SSC5DA1L4H1 1573 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 A0A1B0GUL7 405 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 TNNI2P48788 182 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 ATP8B2P98198 1209 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 TFCP2Q12800 502 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 G3BP1Q13283 466 aaKnown RBP eCLIP15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 APOBEC3HQ6NTF7 200 aaKnown RBP15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 MOB2Q70IA6 237 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 FAM83AQ86UY5 434 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 ITPRIPQ8IWB1 547 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 GPR108Q9NPR9 543 aa15.12■□□□□ 0.01
NSMCE1-204ENST00000563273 XAGE2Q96GT9 111 aa15.11■□□□□ 0.01
NSMCE1-204ENST00000563273 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
NSMCE1-204ENST00000563273 ANGEL1Q9UNK9 670 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-204ENST00000563273 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
NSMCE1-204ENST00000563273 LDHBP07195 334 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 ADORA1P30542 326 aa15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 IREB2P48200 963 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 TM4SF4P48230 202 aa15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 TIMM10P62072 90 aa15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 TMOD2Q9NZR1 351 aa15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 ECM29Q5VYK3 1845 aa15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 RPAP1Q9BWH6 1393 aaPredicted RBP15.1■□□□□ 0.01
NSMCE1-204ENST00000563273 ZBTB48P10074 688 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-204ENST00000563273 PRDX5P30044 214 aa15.09■□□□□ 0.01
NSMCE1-204ENST00000563273 RASGRF1Q13972 1273 aa15.09■□□□□ 0.01
NSMCE1-204ENST00000563273 SPRYD7Q5W111 196 aa15.09■□□□□ 0.01
NSMCE1-204ENST00000563273 HOOK2Q96ED9 719 aa15.09■□□□□ 0.01
NSMCE1-204ENST00000563273 TCP10L2B9ZVM9 353 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 USP2O75604 605 aaPredicted RBP15.08■□□□□ 0
NSMCE1-204ENST00000563273 ARID4AP29374 1257 aaPredicted RBP15.08■□□□□ 0
NSMCE1-204ENST00000563273 SREBF2Q12772 1141 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 SPTY2D1Q68D10 685 aaPredicted RBP15.08■□□□□ 0
NSMCE1-204ENST00000563273 ANKRD13AQ8IZ07 590 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 SLC10A4Q96EP9 437 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 FAM163AQ96GL9 167 aaPredicted RBP15.08■□□□□ 0
NSMCE1-204ENST00000563273 RNF186Q9NXI6 227 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 DAGLAQ9Y4D2 1042 aa15.08■□□□□ 0
NSMCE1-204ENST00000563273 IGSF3O75054 1194 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 INHBEP58166 350 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 PRKG1Q13976 671 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 NOM1Q5C9Z4 860 aaKnown RBP15.07■□□□□ 0
NSMCE1-204ENST00000563273 CEP85Q6P2H3 762 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 SLF2Q8IX21 1173 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 CFHR5Q9BXR6 569 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 TMEM39BQ9GZU3 492 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
NSMCE1-204ENST00000563273 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.07■□□□□ 0
NSMCE1-204ENST00000563273 GAKO14976 1311 aa15.07■□□□□ 0
NSMCE1-204ENST00000563273 UQCRFS1P1P0C7P4 283 aa15.06■□□□□ 0
NSMCE1-204ENST00000563273 PANK1Q8TE04 598 aa15.06■□□□□ 0
NSMCE1-204ENST00000563273 NEUROD6Q96NK8 337 aa15.06■□□□□ 0
NSMCE1-204ENST00000563273 TSKSQ9UJT2 592 aa15.06■□□□□ 0
NSMCE1-204ENST00000563273 DDX19BQ9UMR2 479 aa15.06■□□□□ 0
NSMCE1-204ENST00000563273 MANSC4A6NHS7 340 aaPredicted RBP15.05■□□□□ -0
NSMCE1-204ENST00000563273 SURF6O75683 361 aaKnown RBP15.05■□□□□ -0
NSMCE1-204ENST00000563273 TRPA1O75762 1119 aa15.05■□□□□ -0
NSMCE1-204ENST00000563273 DIXDC1Q155Q3 683 aa15.05■□□□□ -0
NSMCE1-204ENST00000563273 TNNI3KQ59H18 835 aa15.05■□□□□ -0
NSMCE1-204ENST00000563273 GORABQ5T7V8 394 aa15.05■□□□□ -0
NSMCE1-204ENST00000563273 CDC42EP5Q6NZY7 148 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms