RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 WNT8BQ93098 351 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 RSRP1Q9BUV0 290 aa9.2□□□□□ -0.94
LINC00557-201ENST00000563184 SRA1Q9HD15 236 aaKnown RBP9.2□□□□□ -0.94
LINC00557-201ENST00000563184 BMP6P22004 513 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
LINC00557-201ENST00000563184 LIG3P49916 1009 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 RACK1P63244 317 aaKnown RBP9.19□□□□□ -0.94
LINC00557-201ENST00000563184 KLHDC7BQ96G42 594 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 DCAF5Q96JK2 942 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 NRSN2Q9GZP1 204 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 OSGEPQ9NPF4 335 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 KBTBD4Q9NVX7 518 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 DDX41Q9UJV9 622 aaKnown RBP9.19□□□□□ -0.94
LINC00557-201ENST00000563184 PCDHGB7Q9Y5F8 929 aa9.19□□□□□ -0.94
LINC00557-201ENST00000563184 PPP2R3AQ06190 1150 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 C19orf57Q0VDD7 668 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 TRAPPC3LQ5T215 181 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 FAM117BQ6P1L5 589 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 SULF2Q8IWU5 870 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 PHC3Q8NDX5 983 aa9.18□□□□□ -0.94
LINC00557-201ENST00000563184 A0A0A0MRY4 1105 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 GNB5O14775 395 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 NME2P22392 152 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 GSTM4Q03013 218 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 PDZD3Q86UT5 571 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 USP48Q86UV5 1035 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 PLVAPQ9BX97 442 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 TLR6Q9Y2C9 796 aa9.17□□□□□ -0.94
LINC00557-201ENST00000563184 ADAM11O75078 769 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 FOXD4L6Q3SYB3 417 aaPredicted RBP9.16□□□□□ -0.94
LINC00557-201ENST00000563184 FOXD4L3Q6VB84 417 aaPredicted RBP9.16□□□□□ -0.94
LINC00557-201ENST00000563184 DTWD1Q8N5C7 304 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 KLHL23Q8NBE8 558 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 RHOVQ96L33 236 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 TMEM74Q96NL1 305 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 TGIF2Q9GZN2 237 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 KCNK4Q9NYG8 393 aa9.16□□□□□ -0.94
LINC00557-201ENST00000563184 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 DDX3YO15523 660 aaKnown RBP9.15□□□□□ -0.94
LINC00557-201ENST00000563184 ECEL1O95672 775 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 CTSBP07858 339 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 RLBP1P12271 317 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 TFE3P19532 575 aaPredicted RBP9.15□□□□□ -0.94
LINC00557-201ENST00000563184 ARNTP27540 789 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 ARL4DP49703 201 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 AGMOQ6ZNB7 445 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 FBXO11Q86XK2 927 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 MAP4K3Q8IVH8 894 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 FMR1NBQ8N0W7 255 aaPredicted RBP9.15□□□□□ -0.94
LINC00557-201ENST00000563184 GRIN3AQ8TCU5 1115 aa9.15□□□□□ -0.94
LINC00557-201ENST00000563184 NOP53Q9NZM5 478 aaKnown RBP9.15□□□□□ -0.94
LINC00557-201ENST00000563184 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.15□□□□□ -0.94
LINC00557-201ENST00000563184 DLL1O00548 723 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 GBP2P32456 591 aaPredicted RBP9.14□□□□□ -0.95
LINC00557-201ENST00000563184 ZNF252P-AS1Q0IIN9 211 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 AP3B2Q13367 1082 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
LINC00557-201ENST00000563184 RELL1Q8IUW5 271 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 ACBD3Q9H3P7 528 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 ADAMTS1Q9UHI8 967 aa9.14□□□□□ -0.95
LINC00557-201ENST00000563184 MINDY4BA8MYZ0 360 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 GARTP22102 1010 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 RPS26P62854 115 aaKnown RBP9.13□□□□□ -0.95
LINC00557-201ENST00000563184 PWP1Q13610 501 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 PLA2G4EQ3MJ16 856 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 GPAT2Q6NUI2 795 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 PCDHB5Q9Y5E4 795 aa9.13□□□□□ -0.95
LINC00557-201ENST00000563184 PF4P02776 101 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 CD68P34810 354 aaPredicted RBP9.12□□□□□ -0.95
LINC00557-201ENST00000563184 NLRP12P59046 1061 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 ZNF654Q8IZM8 581 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 DDX54Q8TDD1 881 aaKnown RBP9.12□□□□□ -0.95
LINC00557-201ENST00000563184 KCNQ5Q9NR82 932 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 CYP8B1Q9UNU6 501 aa9.12□□□□□ -0.95
LINC00557-201ENST00000563184 LOC100289279A0A1B0GTE1 492 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 GSTP1P09211 210 aaKnown RBP9.11□□□□□ -0.95
LINC00557-201ENST00000563184 MAOBP27338 520 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 COL8A1P27658 744 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 TNNI2P48788 182 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 RAC1P63000 192 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 LMNB2Q03252 620 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 CAMK2GQ13555 558 aaPredicted RBP9.11□□□□□ -0.95
LINC00557-201ENST00000563184 POU4F3Q15319 338 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 GAL3ST3Q96A11 431 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 EMILIN2Q9BXX0 1053 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 CCSER2Q9H7U1 834 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 CBX8Q9HC52 389 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 CACNA2D2Q9NY47 1150 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 SAMM50Q9Y512 469 aa9.11□□□□□ -0.95
LINC00557-201ENST00000563184 DLGAP3O95886 979 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 CYP11A1P05108 521 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 EIF4A3P38919 411 aaKnown RBP9.1□□□□□ -0.95
LINC00557-201ENST00000563184 FAM160A1Q05DH4 1040 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 LLGL2Q6P1M3 1020 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 FBXL19Q6PCT2 694 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
LINC00557-201ENST00000563184 C8orf37Q96NL8 207 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms