RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 ST18O60284 1047 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 TBC1D12O60347 775 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 SASH1O94885 1247 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 EPHX2P34913 555 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 EPS15P42566 896 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 GYG1P46976 350 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 ZNF804AQ7Z570 1209 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 AGBL3Q8NEM8 1001 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 TDRD7Q8NHU6 1098 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 RBM46Q8TBY0 533 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 PTCD2Q8WV60 388 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 ADAMTSL1Q8N6G6 1762 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 IFIT1P09914 478 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 HIBADHP31937 336 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 CAMK2BQ13554 666 aa7.67□□□□□ -1.18
CNOT1-204ENST00000563130 RSBN1LQ6PCB5 846 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 PNMA8AQ86V59 439 aaPredicted RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 CNOT7Q9UIV1 285 aaKnown RBP7.67□□□□□ -1.18
CNOT1-204ENST00000563130 SHTN1A0MZ66 631 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 C1QTNF8P60827 252 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 TFCP2Q12800 502 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 G3BP1Q13283 466 aaKnown RBP eCLIP7.66□□□□□ -1.183e-9■■■□□ 18.5
CNOT1-204ENST00000563130 E2F4Q16254 413 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 ATP2B3Q16720 1220 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 TTLL5Q6EMB2 1281 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 FAM205AQ6ZU69 1335 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 MYO3BQ8WXR4 1341 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 SURF6O75683 361 aaKnown RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 SLC5A1P13866 664 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 BCAMP50895 628 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 ZNF280AP59817 542 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 FKBP1AP62942 108 aaKnown RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 GTF2IP78347 998 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 CAVIN4Q5BKX8 364 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 USP50Q70EL3 339 aaPredicted RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 ADARB2Q9NS39 739 aaKnown RBP7.66□□□□□ -1.18
CNOT1-204ENST00000563130 PCDHGA4Q9Y5G9 962 aa7.66□□□□□ -1.18
CNOT1-204ENST00000563130 A0A1B0GUL7 405 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 HIRAP54198 1017 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-204ENST00000563130 TIMM10P62072 90 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 FSTL1Q12841 308 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 LDHDQ86WU2 507 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 C16orf71Q8IYS4 520 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-204ENST00000563130 CERS5Q8N5B7 392 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 OXER1Q8TDS5 423 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 MXD3Q9BW11 206 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 GPR108Q9NPR9 543 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 PGAP2Q9UHJ9 254 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 AKAP2Q9Y2D5 859 aa7.65□□□□□ -1.18
CNOT1-204ENST00000563130 H7C1D1 291 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 EGFRP00533 1210 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 USP17L8P0C7I0 530 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 HOXB1P14653 301 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-204ENST00000563130 MMP14P50281 582 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 GPR153Q6NV75 609 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 SMC1BQ8NDV3 1235 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 HMMRO75330 724 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 ADORA1P30542 326 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 CCDC102BQ68D86 513 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 SAMD7Q7Z3H4 446 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 VPS37DQ86XT2 251 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 TRPM4Q8TD43 1214 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 ZC3H15Q8WU90 426 aaKnown RBP7.64□□□□□ -1.19
CNOT1-204ENST00000563130 XAGE2Q96GT9 111 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 CRBNQ96SW2 442 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 EXOC6BQ9Y2D4 811 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
CNOT1-204ENST00000563130 ARAP2Q8WZ64 1704 aa7.64□□□□□ -1.19
CNOT1-204ENST00000563130 COL1A1P02452 1464 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 ITGBL1O95965 494 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 PHKA1P46020 1223 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 TNNI3KQ59H18 835 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 ARSIQ5FYB1 569 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 PCDHB15Q9Y5E8 787 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 FPGT-TNNI3KV9GXZ4 949 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 SEMA3EO15041 775 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 AAMPQ13685 434 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 HSP90AB4PQ58FF6 505 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 MFSD14BQ5SR56 506 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 ERC1Q8IUD2 1116 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 EAF2Q96CJ1 260 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 ZBED3Q96IU2 234 aaPredicted RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 MYOZ2Q9NPC6 264 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 JAG2Q9Y219 1238 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 PDS5AQ29RF7 1337 aaKnown RBP7.63□□□□□ -1.19
CNOT1-204ENST00000563130 PASKQ96RG2 1323 aa7.63□□□□□ -1.19
CNOT1-204ENST00000563130 OS9Q13438 667 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 KIF4BQ2VIQ3 1234 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 TBC1D10BQ4KMP7 808 aaPredicted RBP7.62□□□□□ -1.19
CNOT1-204ENST00000563130 OGFOD1Q8N543 542 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 RHPN1Q8TCX5 695 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 TBC1D22AQ8WUA7 517 aa7.62□□□□□ -1.19
CNOT1-204ENST00000563130 FBXW7Q969H0 707 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms