RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 PUS3Q9BZE2 481 aaKnown RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 GBA2Q9HCG7 927 aaPredicted RBP11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 JAG2Q9Y219 1238 aa11.61□□□□□ -0.55
CHRFAM7A-204ENST00000562729 A0A1B0GUL6 1792 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 SASH1O94885 1247 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 GYG1P46976 350 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 DLGAP5Q15398 846 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ANKRD44Q8N8A2 993 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 KAZALD1Q96I82 304 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 GMLQ99445 158 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ASTN2O75129 1339 aaPredicted RBP11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 PITPNM2Q9BZ72 1349 aa11.6□□□□□ -0.55
CHRFAM7A-204ENST00000562729 GNAI3P08754 354 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 IFIT1P09914 478 aaKnown RBP11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 IL1R1P14778 569 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 DLK2Q6UY11 383 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 TNS4Q8IZW8 715 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 ARHGAP45Q92619 1136 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 SIL1Q9H173 461 aa11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 POLR2AP24928 1970 aaKnown RBP11.59□□□□□ -0.55
CHRFAM7A-204ENST00000562729 WNT10BO00744 389 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FOXN1O15353 648 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 AOC2O75106 756 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PDE8BO95263 885 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 MAP2K2P36507 400 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZNF157P51786 506 aaPredicted RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CHAF1AQ13111 956 aaPredicted RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PUM3Q15397 648 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 HHIPL1Q96JK4 782 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 SCAF8Q9UPN6 1271 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 LRRFIP2Q9Y608 721 aaKnown RBP11.58□□□□□ -0.56
CHRFAM7A-204ENST00000562729 EYA2O00167 538 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 BCAR3O75815 825 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 SLC5A1P13866 664 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 HOXB1P14653 301 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 NOGQ13253 232 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 IFFO2Q5TF58 517 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 RGMBQ6NW40 437 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CCDC102AQ96A19 550 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 IQSEC3Q9UPP2 1182 aaPredicted RBP11.57□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FKBP1AP62942 108 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CFAP100Q494V2 611 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 MEIS3Q99687 375 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 WBP1LQ9NX94 342 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CEP126Q9P2H0 1117 aa11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
CHRFAM7A-204ENST00000562729 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 TRIM27P14373 513 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 LBX1P52954 281 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FKBP1BP68106 108 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PRAMEF18Q5VWM3 479 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 INTS3Q68E01 1043 aaKnown RBP11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CERS5Q8N5B7 392 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 TBC1D22AQ8WUA7 517 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 GNL3LQ9NVN8 582 aaKnown RBP11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 IRS2Q9Y4H2 1338 aa11.55□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CLRN2A0PK11 232 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CA12O43570 354 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 CIAO1O76071 339 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 GNAI2P04899 355 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 IL15P40933 162 aaPredicted RBP11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 BCAMP50895 628 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PRKG1Q13976 671 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ATP2B3Q16720 1220 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ARMC9Q7Z3E5 817 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZNF710Q8N1W2 664 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 LPIN2Q92539 896 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZBED9Q6R2W3 1325 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FAM205AQ6ZU69 1335 aa11.54□□□□□ -0.56
CHRFAM7A-204ENST00000562729 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 TNFAIP1Q13829 316 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 FBXO33Q7Z6M2 555 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 DEFB129Q9H1M3 183 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PRDM10Q9NQV6 1147 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 SERPINA10Q9UK55 444 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 PAPPA2Q9BXP8 1791 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 MAST3O60307 1309 aa11.53□□□□□ -0.56
CHRFAM7A-204ENST00000562729 UBE2Q2LH0YL09 131 aa11.52□□□□□ -0.57
CHRFAM7A-204ENST00000562729 PPP1R12BO60237 982 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms