RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 RETREG3Q86VR2 466 aa9.28□□□□□ -0.92
SNX29-201ENST00000562510 TNS4Q8IZW8 715 aa9.28□□□□□ -0.92
SNX29-201ENST00000562510 FAM89AQ96GI7 184 aa9.28□□□□□ -0.92
SNX29-201ENST00000562510 TRMT112Q9UI30 125 aaKnown RBP9.28□□□□□ -0.92
SNX29-201ENST00000562510 NIP7Q9Y221 180 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX29-201ENST00000562510 V9GY48 417 aaPredicted RBP9.28□□□□□ -0.92
SNX29-201ENST00000562510 AFDNP55196 1824 aaKnown RBP9.28□□□□□ -0.92
SNX29-201ENST00000562510 NUP98P52948 1817 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 CSF1RP07333 972 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 RFC4P35249 363 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 RFX5P48382 616 aaPredicted RBP9.27□□□□□ -0.93
SNX29-201ENST00000562510 MYSM1Q5VVJ2 828 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 SYNE4Q8N205 404 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 UTP14AQ9BVJ6 771 aaKnown RBP9.27□□□□□ -0.93
SNX29-201ENST00000562510 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 COPRSQ9NQ92 184 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 PIM2Q9P1W9 311 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 SRP68Q9UHB9 627 aaKnown RBP9.27□□□□□ -0.93
SNX29-201ENST00000562510 PARP3Q9Y6F1 533 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 C10orf71Q711Q0 1435 aa9.27□□□□□ -0.93
SNX29-201ENST00000562510 USP42Q9H9J4 1324 aaKnown RBP9.27□□□□□ -0.93
SNX29-201ENST00000562510 TUBGCP6Q96RT7 1819 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 APBB1O00213 710 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 IRS4O14654 1257 aaPredicted RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 SPTLC1O15269 473 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 SMARCA5O60264 1052 aaPredicted RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 NTSR2O95665 410 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 GYS1P13807 737 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 KCNA3P22001 575 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 MTMR2Q13614 643 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 TBC1D9BQ66K14 1250 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 SMC1BQ8NDV3 1235 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 KIF1BPQ96EK5 621 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 IRX2Q9BZI1 471 aaPredicted RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 PA2G4Q9UQ80 394 aaKnown RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 ANKRD36CQ5JPF3 1778 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
SNX29-201ENST00000562510 ZC3H4Q9UPT8 1303 aaKnown RBP9.26□□□□□ -0.93
SNX29-201ENST00000562510 BCORQ6W2J9 1755 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 PDE8AO60658 829 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 HSP90B1P14625 803 aaKnown RBP9.25□□□□□ -0.93
SNX29-201ENST00000562510 GJA5P36382 358 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 G3BP1Q13283 466 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNX29-201ENST00000562510 PLA2G2CQ5R387 149 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 ERC1Q8IUD2 1116 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 CCDC24Q8N4L8 307 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 RHPN1Q8TCX5 695 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 DDRGK1Q96HY6 314 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 SETDB2Q96T68 719 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 POLR3EQ9NVU0 708 aa9.25□□□□□ -0.93
SNX29-201ENST00000562510 FAM177BA6PVY3 158 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
SNX29-201ENST00000562510 SASH1O94885 1247 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 PRKCSHP14314 528 aaPredicted RBP9.24□□□□□ -0.93
SNX29-201ENST00000562510 JUNDP17535 347 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 CTSWP56202 376 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 HTRA3P83110 453 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 SLC10A5Q5PT55 438 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 KLHDC4Q8TBB5 520 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 RRAGCQ9HB90 399 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 RNF181Q9P0P0 153 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
SNX29-201ENST00000562510 SCN7AQ01118 1682 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 ZBTB24O43167 697 aaPredicted RBP9.23□□□□□ -0.93
SNX29-201ENST00000562510 HCLS1P14317 486 aaPredicted RBP9.23□□□□□ -0.93
SNX29-201ENST00000562510 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
SNX29-201ENST00000562510 MMP16P51512 607 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 OS9Q13438 667 aaPredicted RBP9.23□□□□□ -0.93
SNX29-201ENST00000562510 CCDC57Q2TAC2 916 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 LIAT1Q6ZQX7 453 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 PRR7Q8TB68 274 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 OTUD7AQ8TE49 926 aaPredicted RBP9.23□□□□□ -0.93
SNX29-201ENST00000562510 NYXQ9GZU5 481 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 SIL1Q9H173 461 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 OSBPL3Q9H4L5 887 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 IL1RAPL2Q9NP60 686 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 LIMD1Q9UGP4 676 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 SALL3Q9BXA9 1300 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 UBR3Q6ZT12 1888 aa9.23□□□□□ -0.93
SNX29-201ENST00000562510 VEGFAP15692 232 aaPredicted RBP9.22□□□□□ -0.93
SNX29-201ENST00000562510 TM4SF1P30408 202 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 IFIT5Q13325 482 aaKnown RBP9.22□□□□□ -0.93
SNX29-201ENST00000562510 NFIXQ14938 502 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 ERFEQ4G0M1 354 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 ATG9AQ7Z3C6 839 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 BACH2Q9BYV9 841 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 GREM2Q9H772 168 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 STAP2Q9UGK3 403 aa9.22□□□□□ -0.93
SNX29-201ENST00000562510 ANKRD18BA2A2Z9 1011 aa9.21□□□□□ -0.94
SNX29-201ENST00000562510 EYA2O00167 538 aa9.21□□□□□ -0.94
SNX29-201ENST00000562510 CIAO1O76071 339 aa9.21□□□□□ -0.94
SNX29-201ENST00000562510 ITGA6P23229 1130 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms