RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 KIAA0100Q14667 2235 aaKnown RBP31.65■■■□□ 2.66
NME3-202ENST00000561637 EYA2O00167 538 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 IGF2BP3O00425 579 aaKnown RBP eCLIP31.64■■■□□ 2.66
NME3-202ENST00000561637 MMP14P50281 582 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 HABP4Q5JVS0 413 aaKnown RBP31.64■■■□□ 2.66
NME3-202ENST00000561637 MFSD14BQ5SR56 506 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 ATG9AQ7Z3C6 839 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 SLC10A4Q96EP9 437 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 SIL1Q9H173 461 aa31.64■■■□□ 2.66
NME3-202ENST00000561637 MANSC4A6NHS7 340 aaPredicted RBP31.63■■■□□ 2.65
NME3-202ENST00000561637 BCAMP50895 628 aa31.63■■■□□ 2.65
NME3-202ENST00000561637 CHAF1AQ13111 956 aaPredicted RBP31.63■■■□□ 2.65
NME3-202ENST00000561637 PRMT6Q96LA8 375 aaPredicted RBP31.63■■■□□ 2.65
NME3-202ENST00000561637 DEFB129Q9H1M3 183 aa31.63■■■□□ 2.65
NME3-202ENST00000561637 SPDYE2BA6NHP3 402 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 SPDYE6P0CI01 402 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 FGFR2P21802 821 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 MTMR14Q8NCE2 650 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 WNK4Q96J92 1243 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 KIF16BQ96L93 1317 aa31.62■■■□□ 2.65
NME3-202ENST00000561637 PA2G4Q9UQ80 394 aaKnown RBP31.62■■■□□ 2.65
NME3-202ENST00000561637 MAP3K11Q16584 847 aa31.61■■■□□ 2.65
NME3-202ENST00000561637 ARAP2Q8WZ64 1704 aa31.61■■■□□ 2.65
NME3-202ENST00000561637 COL1A1P02452 1464 aaPredicted RBP31.6■■■□□ 2.65
NME3-202ENST00000561637 TRIM27P14373 513 aa31.6■■■□□ 2.65
NME3-202ENST00000561637 INHBEP58166 350 aa31.6■■■□□ 2.65
NME3-202ENST00000561637 TTF2Q9UNY4 1162 aaKnown RBP31.6■■■□□ 2.65
NME3-202ENST00000561637 INTS3Q68E01 1043 aaKnown RBP31.59■■■□□ 2.65
NME3-202ENST00000561637 VPS37DQ86XT2 251 aa31.59■■■□□ 2.65
NME3-202ENST00000561637 FRAT1Q92837 279 aaPredicted RBP31.59■■■□□ 2.65
NME3-202ENST00000561637 ZBTB48P10074 688 aaPredicted RBP31.58■■■□□ 2.65
NME3-202ENST00000561637 RBM5P52756 815 aaKnown RBP eCLIP31.58■■■□□ 2.65
NME3-202ENST00000561637 PUM3Q15397 648 aaKnown RBP31.58■■■□□ 2.65
NME3-202ENST00000561637 ARHGAP45Q92619 1136 aa31.58■■■□□ 2.65
NME3-202ENST00000561637 CAP1Q01518 475 aa31.57■■■□□ 2.64
NME3-202ENST00000561637 CD99L2Q8TCZ2 262 aa31.57■■■□□ 2.64
NME3-202ENST00000561637 CLUAP1Q96AJ1 413 aa31.57■■■□□ 2.64
NME3-202ENST00000561637 VEZTQ9HBM0 779 aa31.57■■■□□ 2.64
NME3-202ENST00000561637 PTPN22Q9Y2R2 807 aa31.57■■■□□ 2.64
NME3-202ENST00000561637 GJA5P36382 358 aa31.56■■■□□ 2.64
NME3-202ENST00000561637 CAVIN4Q5BKX8 364 aa31.55■■■□□ 2.64
NME3-202ENST00000561637 OTOFQ9HC10 1997 aa31.55■■■□□ 2.64
NME3-202ENST00000561637 PPP1R12BO60237 982 aaPredicted RBP31.54■■■□□ 2.64
NME3-202ENST00000561637 CRHR2Q13324 411 aa31.54■■■□□ 2.64
NME3-202ENST00000561637 FRAT2O75474 233 aaPredicted RBP31.53■■■□□ 2.64
NME3-202ENST00000561637 IFIT1P09914 478 aaKnown RBP31.53■■■□□ 2.64
NME3-202ENST00000561637 EN2P19622 333 aaPredicted RBP31.53■■■□□ 2.64
NME3-202ENST00000561637 NBPF12Q5TAG4 269 aaPredicted RBP31.53■■■□□ 2.64
NME3-202ENST00000561637 ATF7IPQ6VMQ6 1270 aa31.53■■■□□ 2.64
NME3-202ENST00000561637 ERO1AQ96HE7 468 aa31.53■■■□□ 2.64
NME3-202ENST00000561637 TDRD3Q9H7E2 651 aaKnown RBP31.53■■■□□ 2.64
NME3-202ENST00000561637 CRKP46108 304 aa31.52■■■□□ 2.64
NME3-202ENST00000561637 CDAN1Q8IWY9 1227 aa31.52■■■□□ 2.64
NME3-202ENST00000561637 PTPN18Q99952 460 aa31.52■■■□□ 2.64
NME3-202ENST00000561637 ZNF70Q9UC06 446 aaPredicted RBP31.52■■■□□ 2.64
NME3-202ENST00000561637 USP2O75604 605 aaPredicted RBP31.51■■■□□ 2.63
NME3-202ENST00000561637 CIAO1O76071 339 aa31.51■■■□□ 2.63
NME3-202ENST00000561637 SLC5A1P13866 664 aa31.51■■■□□ 2.63
NME3-202ENST00000561637 LPIN2Q92539 896 aa31.51■■■□□ 2.63
NME3-202ENST00000561637 SERPINA10Q9UK55 444 aa31.51■■■□□ 2.63
NME3-202ENST00000561637 PPP2R3BQ9Y5P8 575 aa31.51■■■□□ 2.63
NME3-202ENST00000561637 ATP2B3Q16720 1220 aa31.5■■■□□ 2.63
NME3-202ENST00000561637 SPDYE2Q495Y8 402 aa31.5■■■□□ 2.63
NME3-202ENST00000561637 DZIP1LQ8IYY4 767 aaKnown RBP31.5■■■□□ 2.63
NME3-202ENST00000561637 ARMC5Q96C12 935 aa31.5■■■□□ 2.63
NME3-202ENST00000561637 MYO1BO43795 1136 aa31.49■■■□□ 2.63
NME3-202ENST00000561637 RASA3Q14644 834 aa31.49■■■□□ 2.63
NME3-202ENST00000561637 EFCC1Q9HA90 598 aa31.49■■■□□ 2.63
NME3-202ENST00000561637 IPO8O15397 1037 aaKnown RBP31.48■■■□□ 2.63
NME3-202ENST00000561637 ADORA1P30542 326 aa31.48■■■□□ 2.63
NME3-202ENST00000561637 SUPT20HL1Q3ZLR7 823 aa31.48■■■□□ 2.63
NME3-202ENST00000561637 TMEM57Q8N5G2 664 aa31.48■■■□□ 2.63
NME3-202ENST00000561637 COPRSQ9NQ92 184 aa31.48■■■□□ 2.63
NME3-202ENST00000561637 CEP126Q9P2H0 1117 aa31.48■■■□□ 2.63
NME3-202ENST00000561637 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.48■■■□□ 2.63
NME3-202ENST00000561637 UNCXA6NJT0 531 aa31.47■■■□□ 2.63
NME3-202ENST00000561637 GNAI3P08754 354 aa31.47■■■□□ 2.63
NME3-202ENST00000561637 SRGAP3O43295 1099 aa31.46■■■□□ 2.63
NME3-202ENST00000561637 CACNB3P54284 484 aa31.46■■■□□ 2.63
NME3-202ENST00000561637 SP3Q02447 781 aa31.46■■■□□ 2.63
NME3-202ENST00000561637 TBC1D22AQ8WUA7 517 aa31.46■■■□□ 2.63
NME3-202ENST00000561637 FBXO3Q9UK99 471 aa31.46■■■□□ 2.63
NME3-202ENST00000561637 TESPA1A2RU30 521 aaPredicted RBP31.45■■■□□ 2.63
NME3-202ENST00000561637 TCP10L2B9ZVM9 353 aa31.45■■■□□ 2.63
NME3-202ENST00000561637 IL15P40933 162 aaPredicted RBP31.45■■■□□ 2.63
NME3-202ENST00000561637 PHKA1P46020 1223 aa31.45■■■□□ 2.63
NME3-202ENST00000561637 IREB2P48200 963 aaKnown RBP31.45■■■□□ 2.63
NME3-202ENST00000561637 FXR1P51114 621 aaKnown RBP eCLIP31.45■■■□□ 2.63
NME3-202ENST00000561637 OTUD7BQ6GQQ9 843 aa31.45■■■□□ 2.63
NME3-202ENST00000561637 MYH13Q9UKX3 1938 aa31.45■■■□□ 2.62
NME3-202ENST00000561637 ANKRD13AQ8IZ07 590 aa31.44■■■□□ 2.62
NME3-202ENST00000561637 MTX1Q13505 466 aa31.43■■■□□ 2.62
NME3-202ENST00000561637 ZKSCAN2Q63HK3 967 aa31.43■■■□□ 2.62
NME3-202ENST00000561637 ELP3Q9H9T3 547 aa31.43■■■□□ 2.62
NME3-202ENST00000561637 HDAC5Q9UQL6 1122 aa31.43■■■□□ 2.62
NME3-202ENST00000561637 PNMA6EA0A0J9YXQ4 647 aa31.42■■■□□ 2.62
NME3-202ENST00000561637 TEPSINQ96N21 525 aa31.42■■■□□ 2.62
NME3-202ENST00000561637 TMEM39BQ9GZU3 492 aa31.42■■■□□ 2.62
NME3-202ENST00000561637 ZSWIM8A7E2V4 1837 aa31.41■■■□□ 2.62
NME3-202ENST00000561637 RLBP1P12271 317 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms