RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 LRP2BPQ9P2M1 347 aa19.94■□□□□ 0.78
USB1-204ENST00000561568 RBM5P52756 815 aaKnown RBP eCLIP19.93■□□□□ 0.78
USB1-204ENST00000561568 HIRAP54198 1017 aaPredicted RBP19.93■□□□□ 0.78
USB1-204ENST00000561568 GRIK5Q16478 980 aa19.93■□□□□ 0.78
USB1-204ENST00000561568 TBC1D9Q6ZT07 1266 aa19.93■□□□□ 0.78
USB1-204ENST00000561568 CENPQQ7L2Z9 268 aaPredicted RBP19.93■□□□□ 0.78
USB1-204ENST00000561568 LDHDQ86WU2 507 aa19.93■□□□□ 0.78
USB1-204ENST00000561568 BOLA2Q9H3K6 86 aa19.93■□□□□ 0.78
USB1-204ENST00000561568 PGAP2Q9UHJ9 254 aa19.93■□□□□ 0.78
USB1-204ENST00000561568 MX1P20591 662 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 PRDX5P30044 214 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 HHIPL2Q6UWX4 724 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 TEKT1Q969V4 418 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 HAUS7Q99871 368 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 PPP4R2Q9NY27 417 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 STAP2Q9UGK3 403 aa19.92■□□□□ 0.78
USB1-204ENST00000561568 COL1A1P02452 1464 aaPredicted RBP19.92■□□□□ 0.78
USB1-204ENST00000561568 GLRX3O76003 335 aaKnown RBP19.91■□□□□ 0.78
USB1-204ENST00000561568 LDHCP07864 332 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 CRKP46108 304 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 GSTO1P78417 241 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 TMED8Q6PL24 325 aaPredicted RBP19.91■□□□□ 0.78
USB1-204ENST00000561568 DZIP1Q86YF9 867 aaKnown RBP19.91■□□□□ 0.78
USB1-204ENST00000561568 RBM46Q8TBY0 533 aaKnown RBP19.91■□□□□ 0.78
USB1-204ENST00000561568 TRPM4Q8TD43 1214 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 RAI14Q9P0K7 980 aa19.91■□□□□ 0.78
USB1-204ENST00000561568 WNT10BO00744 389 aa19.9■□□□□ 0.78
USB1-204ENST00000561568 MYO1BO43795 1136 aa19.9■□□□□ 0.78
USB1-204ENST00000561568 EGFRP00533 1210 aa19.9■□□□□ 0.78
USB1-204ENST00000561568 CHADLQ6NUI6 762 aa19.9■□□□□ 0.78
USB1-204ENST00000561568 OTUD7AQ8TE49 926 aaPredicted RBP19.9■□□□□ 0.78
USB1-204ENST00000561568 FAM163AQ96GL9 167 aaPredicted RBP19.9■□□□□ 0.78
USB1-204ENST00000561568 ZDHHC15Q96MV8 337 aa19.9■□□□□ 0.78
USB1-204ENST00000561568 PDE1AP54750 535 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 MECOMQ03112 1051 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 MAP3K12Q12852 859 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 DCPSQ96C86 337 aaKnown RBP19.89■□□□□ 0.77
USB1-204ENST00000561568 ZBED3Q96IU2 234 aaPredicted RBP19.89■□□□□ 0.77
USB1-204ENST00000561568 PRMT6Q96LA8 375 aaPredicted RBP19.89■□□□□ 0.77
USB1-204ENST00000561568 DNAJC2Q99543 621 aaKnown RBP19.89■□□□□ 0.77
USB1-204ENST00000561568 SALL3Q9BXA9 1300 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 PAG1Q9NWQ8 432 aa19.89■□□□□ 0.77
USB1-204ENST00000561568 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
USB1-204ENST00000561568 SPDYE2BA6NHP3 402 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 GOLIM4O00461 696 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 POTEJP0CG39 1038 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 SPDYE6P0CI01 402 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 NBPF9Q3BBW0 867 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 NSUN4Q96CB9 384 aaKnown RBP19.88■□□□□ 0.77
USB1-204ENST00000561568 ANTXR1Q9H6X2 564 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 PIH1D3Q9NQM4 214 aaKnown RBP19.88■□□□□ 0.77
USB1-204ENST00000561568 NDUFB9Q9Y6M9 179 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 MYH13Q9UKX3 1938 aa19.88■□□□□ 0.77
USB1-204ENST00000561568 IDH1O75874 414 aaKnown RBP19.87■□□□□ 0.77
USB1-204ENST00000561568 FSTL1Q12841 308 aa19.87■□□□□ 0.77
USB1-204ENST00000561568 PLEKHM2Q8IWE5 1019 aa19.87■□□□□ 0.77
USB1-204ENST00000561568 PI4K2BQ8TCG2 481 aa19.87■□□□□ 0.77
USB1-204ENST00000561568 OSBPL3Q9H4L5 887 aa19.87■□□□□ 0.77
USB1-204ENST00000561568 AKAP11Q9UKA4 1901 aa19.86■□□□□ 0.77
USB1-204ENST00000561568 AOX1Q06278 1338 aa19.86■□□□□ 0.77
USB1-204ENST00000561568 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
USB1-204ENST00000561568 NAA16Q6N069 864 aaPredicted RBP19.86■□□□□ 0.77
USB1-204ENST00000561568 CDC37L1Q7L3B6 337 aa19.86■□□□□ 0.77
USB1-204ENST00000561568 CNTROBQ8N137 903 aa19.86■□□□□ 0.77
USB1-204ENST00000561568 PITPNM2Q9BZ72 1349 aa19.85■□□□□ 0.77
USB1-204ENST00000561568 ANGEL2Q5VTE6 544 aaKnown RBP19.85■□□□□ 0.77
USB1-204ENST00000561568 TSHZ3Q63HK5 1081 aa19.85■□□□□ 0.77
USB1-204ENST00000561568 MAP1SQ66K74 1059 aaPredicted RBP19.85■□□□□ 0.77
USB1-204ENST00000561568 APOBEC3HQ6NTF7 200 aaKnown RBP19.85■□□□□ 0.77
USB1-204ENST00000561568 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.85■□□□□ 0.77
USB1-204ENST00000561568 ZSCAN25Q6NSZ9 544 aa19.84■□□□□ 0.77
USB1-204ENST00000561568 SULF1Q8IWU6 871 aa19.84■□□□□ 0.77
USB1-204ENST00000561568 TDRD3Q9H7E2 651 aaKnown RBP19.84■□□□□ 0.77
USB1-204ENST00000561568 DAGLAQ9Y4D2 1042 aa19.84■□□□□ 0.77
USB1-204ENST00000561568 PCDHAC2Q9Y5I4 1007 aa19.84■□□□□ 0.77
USB1-204ENST00000561568 GAKO14976 1311 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 GPR75-ASB3A0A0A6YYF3 556 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 BAG3O95817 575 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 MAP4K4O95819 1239 aaPredicted RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 LRRFIP1Q32MZ4 808 aaKnown RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 SLC9C2Q5TAH2 1124 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 APOBEC3FQ8IUX4 373 aaKnown RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 ZNF384Q8TF68 577 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 EDC3Q96F86 508 aaKnown RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 NOL10Q9BSC4 688 aaKnown RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 GGA3Q9NZ52 723 aa19.83■□□□□ 0.77
USB1-204ENST00000561568 ZNF70Q9UC06 446 aaPredicted RBP19.83■□□□□ 0.77
USB1-204ENST00000561568 MROH7-TTC4A0A0A0MT08 1334 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 ITGBL1O95965 494 aaPredicted RBP19.82■□□□□ 0.76
USB1-204ENST00000561568 CYP7A1P22680 504 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 SPDYE2Q495Y8 402 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 KRT26Q7Z3Y9 468 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 MAGEB6Q8N7X4 407 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 KBTBD3Q8NAB2 608 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 USP40Q9NVE5 1235 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 TMOD2Q9NZR1 351 aa19.82■□□□□ 0.76
USB1-204ENST00000561568 ASTN2O75129 1339 aaPredicted RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms